Genetic Predisposition
Based on your genetic markers, your predisposition to this trait is shown below
Your Result
Lower Thrill-seeking tendency
Was this result accurate for you?
Scientific Evidence
Understanding the Data
- SNP: A specific genetic marker relevant to this trait (e.g., rs2588978)
- Genotype: Your genetic makeup at the given SNP location (e.g., CC)
- Variant allele: The alternative DNA sequence at the SNP site
- Variant allele frequency: Percentage of population carrying this variant
- Variant found: Whether the variant was detected in your DNA file
CACNA1C GeneCards
This gene encodes an alpha-1 subunit of a voltage-dependent calcium channel. Calcium channels mediate the influx of calcium ions into the cell upon membrane polarization. The alpha-1 subunit consists of 24 transmembrane segments and forms the pore through which ions pass into the cell. The calcium channel consists of a complex of alpha-1, alpha-2/delta, beta, and gamma subunits in a 1:1:1:1 ratio. There are multiple isoforms of each of these proteins, either encoded by different genes or the result of alternative splicing of transcripts. The protein encoded by this gene binds to and is inhibited by dihydropyridine. Alternative splicing results in many transcript variants encoding different proteins. Some of the predicted proteins may not produce functional ion channel subunits.
Genomic Location
Associated SNPs
| SNP | Genotype | Ref. Allele | Variant Allele | Frequency | Status |
|---|---|---|---|---|---|
| rs2239030 | G A | G | A | 42.90% | Detected |
CADM2 GeneCards
cell adhesion molecule 2
Genomic Location
Associated SNPs
| SNP | Genotype | Ref. Allele | Variant Allele | Frequency | Status |
|---|---|---|---|---|---|
| rs1694933 | C A | C | A | 48.57% | Detected |
| rs116275905 | -- | G | A | 4.89% | No Data |
| rs78841189 | -- | T | A | 13.36% | No Data |
| rs1472302 | -- | C | T | 47.65% | No Data |
| rs10433500 | -- | G | A | 63.21% | No Data |
| rs76363701 | -- | T | C | 95.10% | No Data |
| rs7653193 | -- | G | A | 31.70% | No Data |
| rs7645787 | -- | C | T | 0.29% | No Data |
| rs11710504 | -- | T | G | 93.11% | No Data |
| rs73130739 | -- | T | C | 98.35% | No Data |
| rs73132375 | -- | A | G | 87.43% | No Data |
| rs67379620 | -- | C | T | 15.49% | No Data |
| rs1988552 | -- | A | G | 9.34% | No Data |
CDH9 GeneCards
This gene encodes a type II classical cadherin from the cadherin superfamily, integral membrane proteins that mediate calcium-dependent cell-cell adhesion. Mature cadherin proteins are composed of a large N-terminal extracellular domain, a single membrane-spanning domain, and a small, highly conserved C-terminal cytoplasmic domain. The extracellular domain consists of 5 subdomains, each containing a cadherin motif, and appears to determine the specificity of the protein's homophilic cell adhesion activity. Type II (atypical) cadherins are defined based on their lack of a HAV cell adhesion recognition sequence specific to type I cadherins.
Genomic Location
Associated SNPs
| SNP | Genotype | Ref. Allele | Variant Allele | Frequency | Status |
|---|---|---|---|---|---|
| rs10067113 | C T | C | T | 62.27% | Detected |
ESRRG GeneCards
This gene encodes a member of the estrogen receptor-related receptor (ESRR) family, which belongs to the nuclear hormone receptor superfamily. All members of the ESRR family share an almost identical DNA binding domain, which is composed of two C4-type zinc finger motifs. The ESRR members are orphan nuclear receptors
Genomic Location
Associated SNPs
| SNP | Genotype | Ref. Allele | Variant Allele | Frequency | Status |
|---|---|---|---|---|---|
| rs2813711 | G G | A | G | 15.82% | Detected |
GABRA2 GeneCards
GABA is the major inhibitory neurotransmitter in the mammalian brain where it acts at GABA-A receptors, which are ligand-gated chloride channels. Chloride conductance of these channels can be modulated by agents such as benzodiazepines that bind to the GABA-A receptor. At least 16 distinct subunits of GABA-A receptors have been identified. Alternatively spliced transcript variants encoding different isoforms have been found for this gene.
Genomic Location
Associated SNPs
| SNP | Genotype | Ref. Allele | Variant Allele | Frequency | Status |
|---|---|---|---|---|---|
| rs490434 | G G | A | G | 42.14% | Detected |
IRX3 GeneCards
iroquois homeobox 3
Genomic Location
Associated SNPs
| SNP | Genotype | Ref. Allele | Variant Allele | Frequency | Status |
|---|---|---|---|---|---|
| rs17260689 | T T | C | T | 30.15% | Detected |
LRFN4 GeneCards
Genomic Location
Associated SNPs
| SNP | Genotype | Ref. Allele | Variant Allele | Frequency | Status |
|---|---|---|---|---|---|
| rs10160758 | C C | T | C | 73.09% | Detected |
LRFN5 GeneCards
This gene encodes a protein that belongs to the leucine-rich repeat and fibronectin type III domain-containing family of proteins. A similar protein in mouse, a glycosylated transmembrane protein, is thought to function in presynaptic differentiation.
Genomic Location
Associated SNPs
| SNP | Genotype | Ref. Allele | Variant Allele | Frequency | Status |
|---|---|---|---|---|---|
| rs1393840 | C T | C | T | 40.69% | Detected |
RAB11FIP4 GeneCards
The protein encoded by this gene interacts with RAB11 and is thought to be involved in bringing recycling endosome membranes to the cleavage furrow in late cytokinesis. Hypoxic conditions can lead to an upregulation of the encoded protein and enhance the metastatic potential of hepatocellular carcinoma.
Genomic Location
Associated SNPs
| SNP | Genotype | Ref. Allele | Variant Allele | Frequency | Status |
|---|---|---|---|---|---|
| rs6505239 | G G | A | G | 13.48% | Detected |
TSHZ2 GeneCards
This gene is a member of the teashirt C2H2-type zinc-finger protein family of transcription factors. This gene encodes a protein with five C2H2-type zinc fingers, a homeobox DNA-binding domain and a coiled-coil domain. This nuclear protein is predicted to act as a transcriptional repressor. This gene is thought to play a role in the development and progression of breast and other types of cancer. Alternative splicing results in multiple transcript variants encoding different isoforms.
Genomic Location
Associated SNPs
| SNP | Genotype | Ref. Allele | Variant Allele | Frequency | Status |
|---|---|---|---|---|---|
| rs2752914 | C C | T | C | 59.66% | Detected |
ZBTB18 GeneCards
This gene encodes a C2H2-type zinc finger protein which acts a transcriptional repressor of genes involved in neuronal development. The encoded protein recognizes a specific sequence motif and recruits components of chromatin to target genes. Alternative splicing results in multiple transcript variants.
Genomic Location
Associated SNPs
| SNP | Genotype | Ref. Allele | Variant Allele | Frequency | Status |
|---|---|---|---|---|---|
| rs2953329 | G A | G | A | 59.40% | Detected |
ZNF618 GeneCards
zinc finger protein 618
Genomic Location
Associated SNPs
| SNP | Genotype | Ref. Allele | Variant Allele | Frequency | Status |
|---|---|---|---|---|---|
| rs10817520 | C T | C | T | 34.26% | Detected |
ACE GeneCards
This gene encodes an enzyme involved in blood pressure regulation and electrolyte balance. It catalyzes the conversion of angiotensin I into a physiologically active peptide angiotensin II. Angiotensin II is a potent vasopressor and aldosterone-stimulating peptide that controls blood pressure and fluid-electrolyte balance. This angiotensin converting enzyme (ACE) also inactivates the vasodilator protein, bradykinin. Accordingly, the encoded enzyme increases blood pressure and is a drug target of ACE inhibitors, which are often prescribed to reduce blood pressure. This enzyme additionally plays a role in fertility through its ability to cleave and release GPI-anchored membrane proteins in spermatozoa. Many studies have associated the presence or absence of a 287 bp Alu repeat element in this gene with the levels of circulating enzyme. This polymorphism, as well as mutations in this gene, have been implicated in a wide variety of diseases including cardiovascular pathophysiologies, psoriasis, renal disease, stroke, and Alzheimer's disease. Regulation of the homologous ACE2 gene may be involved in progression of disease caused by several human coronaviruses, including SARS-CoV and SARS-CoV-2. Alternative splicing results in multiple transcript variants encoding both somatic (sACE) and male-specific testicular (tACE) isoforms.
Genomic Location
Associated SNPs
| SNP | Genotype | Ref. Allele | Variant Allele | Frequency | Status |
|---|---|---|---|---|---|
| rs149418624 | -- | G | A | 23.35% | No Data |
ACVR2A GeneCards
Genomic Location
Associated SNPs
| SNP | Genotype | Ref. Allele | Variant Allele | Frequency | Status |
|---|---|---|---|---|---|
| rs13023277 | -- | A | G | 66.18% | No Data |
AKT3 GeneCards
The protein encoded by this gene is a member of the AKT, also called PKB, serine/threonine protein kinase family. AKT kinases are known to be regulators of cell signaling in response to insulin and growth factors. They are involved in a wide variety of biological processes including cell proliferation, differentiation, apoptosis, tumorigenesis, as well as glycogen synthesis and glucose uptake. This kinase has been shown to be stimulated by platelet-derived growth factor (PDGF), insulin, and insulin-like growth factor 1 (IGF1). Alternatively splice transcript variants encoding distinct isoforms have been described.
Genomic Location
Associated SNPs
| SNP | Genotype | Ref. Allele | Variant Allele | Frequency | Status |
|---|---|---|---|---|---|
| rs12023775 | -- | C | T | 64.43% | No Data |
ANK3 GeneCards
Ankyrins are a family of proteins that are believed to link the integral membrane proteins to the underlying spectrin-actin cytoskeleton and play key roles in activities such as cell motility, activation, proliferation, contact, and the maintenance of specialized membrane domains. Multiple isoforms of ankyrin with different affinities for various target proteins are expressed in a tissue-specific, developmentally regulated manner. Most ankyrins are typically composed of three structural domains: an amino-terminal domain containing multiple ankyrin repeats
Genomic Location
Associated SNPs
| SNP | Genotype | Ref. Allele | Variant Allele | Frequency | Status |
|---|---|---|---|---|---|
| rs1171832 | -- | C | G | 51.36% | No Data |
AUTS2 GeneCards
This gene has been implicated in neurodevelopment and as a candidate gene for numerous neurological disorders, including autism spectrum disorders, intellectual disability, and developmental delay. Mutations in this gene have also been associated with non-neurological disorders, such as acute lymphoblastic leukemia, aging of the skin, early-onset androgenetic alopecia, and certain cancers. Alternative splicing results in multiple transcript variants encoding different isoforms.
Genomic Location
Associated SNPs
| SNP | Genotype | Ref. Allele | Variant Allele | Frequency | Status |
|---|---|---|---|---|---|
| rs513150 | -- | G | A | 65.26% | No Data |
BANK1 GeneCards
The protein encoded by this gene is a B-cell-specific scaffold protein that functions in B-cell receptor-induced calcium mobilization from intracellular stores. This protein can also promote Lyn-mediated tyrosine phosphorylation of inositol 1,4,5-trisphosphate receptors. Polymorphisms in this gene are associated with susceptibility to systemic lupus erythematosus. Alternative splicing results in multiple transcript variants.
Genomic Location
Associated SNPs
| SNP | Genotype | Ref. Allele | Variant Allele | Frequency | Status |
|---|---|---|---|---|---|
| rs62322696 | -- | G | A | 45.00% | No Data |
BARHL2 GeneCards
Genomic Location
Associated SNPs
| SNP | Genotype | Ref. Allele | Variant Allele | Frequency | Status |
|---|---|---|---|---|---|
| rs55817211 | -- | C | T | 30.07% | No Data |
BCAS1 GeneCards
brain enriched myelin associated protein 1
Genomic Location
Associated SNPs
| SNP | Genotype | Ref. Allele | Variant Allele | Frequency | Status |
|---|---|---|---|---|---|
| rs16998583 | -- | C | G | 82.60% | No Data |
BCAT1 GeneCards
This gene encodes the cytosolic form of the enzyme branched-chain amino acid transaminase. This enzyme catalyzes the reversible transamination of branched-chain alpha-keto acids to branched-chain L-amino acids essential for cell growth. Two different clinical disorders have been attributed to a defect of branched-chain amino acid transamination: hypervalinemia and hyperleucine-isoleucinemia. As there is also a gene encoding a mitochondrial form of this enzyme, mutations in either gene may contribute to these disorders. Alternatively spliced transcript variants have been described.
Genomic Location
Associated SNPs
| SNP | Genotype | Ref. Allele | Variant Allele | Frequency | Status |
|---|---|---|---|---|---|
| rs11047498 | -- | T | C | 38.72% | No Data |
BCL11B GeneCards
This gene encodes a C2H2-type zinc finger protein and is closely related to BCL11A, a gene whose translocation may be associated with B-cell malignancies. Although the specific function of this gene has not been determined, the encoded protein is known to be a transcriptional repressor, and is regulated by the NURD nucleosome remodeling and histone deacetylase complex. Four alternatively spliced transcript variants encoding distinct isoforms have been found for this gene.
Genomic Location
Associated SNPs
| SNP | Genotype | Ref. Allele | Variant Allele | Frequency | Status |
|---|---|---|---|---|---|
| rs941520 | -- | A | C | 49.75% | No Data |
BHLHE22 GeneCards
This gene encodes a protein that belongs to the basic helix-loop-helix (bHLH) family of transcription factors that regulate cell fate determination, proliferation, and differentiation. A similar protein in mouse is required for the development of the dorsal cochlear nuclei, and is thought to play a role in in the differentiation of neurons involved in sensory input. The mouse protein also functions in retinogenesis.
Genomic Location
Associated SNPs
| SNP | Genotype | Ref. Allele | Variant Allele | Frequency | Status |
|---|---|---|---|---|---|
| rs62519839 | -- | C | T | 11.21% | No Data |
BNC2 GeneCards
This gene encodes a conserved zinc finger protein. The encoded protein functions in skin color saturation. Mutations in this gene are associated with facial pigmented spots. This gene is also associated with susceptibility to adolescent idiopathic scoliosis.
Genomic Location
Associated SNPs
BRINP3 GeneCards
Genomic Location
Associated SNPs
| SNP | Genotype | Ref. Allele | Variant Allele | Frequency | Status |
|---|---|---|---|---|---|
| rs71637264 | -- | A | G | 81.82% | No Data |
CACNA1G GeneCards
Voltage-sensitive calcium channels mediate the entry of calcium ions into excitable cells, and are also involved in a variety of calcium-dependent processes, including muscle contraction, hormone or neurotransmitter release, gene expression, cell motility, cell division, and cell death. This gene encodes a T-type, low-voltage activated calcium channel. The T-type channels generate currents that are both transient, owing to fast inactivation, and tiny, owing to small conductance. T-type channels are thought to be involved in pacemaker activity, low-threshold calcium spikes, neuronal oscillations and resonance, and rebound burst firing. Many alternatively spliced transcript variants encoding different isoforms have been described for this gene.
Genomic Location
Associated SNPs
| SNP | Genotype | Ref. Allele | Variant Allele | Frequency | Status |
|---|---|---|---|---|---|
| rs116920450 | -- | G | A | 1.36% | No Data |
| rs198535 | -- | A | G | 58.48% | No Data |
CAMKMT GeneCards
This gene encodes a class I protein methyltransferase that acts in the formation of trimethyllysine in calmodulin. The protein contains a AdoMet-binding motif and may play a role in calcium-dependent signaling.
Genomic Location
Associated SNPs
| SNP | Genotype | Ref. Allele | Variant Allele | Frequency | Status |
|---|---|---|---|---|---|
| rs77915397 | -- | A | G | 93.20% | No Data |
CDH6 GeneCards
Genomic Location
Associated SNPs
| SNP | Genotype | Ref. Allele | Variant Allele | Frequency | Status |
|---|---|---|---|---|---|
| rs10061911 | -- | A | T | 65.82% | No Data |
CDH8 GeneCards
cadherin 8
Genomic Location
Associated SNPs
| SNP | Genotype | Ref. Allele | Variant Allele | Frequency | Status |
|---|---|---|---|---|---|
| rs117167357 | -- | A | T | 93.09% | No Data |
| rs1319994 | -- | T | C | 59.47% | No Data |
CNTN2 GeneCards
This gene encodes a member of the contactin family of proteins, part of the immunoglobulin superfamily of cell adhesion molecules. The encoded glycosylphosphatidylinositol (GPI)-anchored neuronal membrane protein plays a role in the proliferation, migration, and axon guidance of neurons of the developing cerebellum. A mutation in this gene may be associated with adult myoclonic epilepsy.
Genomic Location
Associated SNPs
| SNP | Genotype | Ref. Allele | Variant Allele | Frequency | Status |
|---|---|---|---|---|---|
| rs11240317 | -- | G | C | 29.87% | No Data |
CSMD3 GeneCards
CUB and Sushi multiple domains 3
Genomic Location
Associated SNPs
| SNP | Genotype | Ref. Allele | Variant Allele | Frequency | Status |
|---|---|---|---|---|---|
| rs28646179 | -- | G | A | 5.32% | No Data |
CTNNA3 GeneCards
This gene encodes a protein that belongs to the vinculin/alpha-catenin family. The encoded protein plays a role in cell-cell adhesion in muscle cells. Mutations in this gene are associated with arrhythmogenic right ventricular dysplasia, familial 13. Alternative splicing results in multiple transcript variants.
Genomic Location
Associated SNPs
| SNP | Genotype | Ref. Allele | Variant Allele | Frequency | Status |
|---|---|---|---|---|---|
| rs1492436 | -- | A | C | 83.52% | No Data |
| rs35377646 | -- | A | G | 83.64% | No Data |
CYLD GeneCards
This gene is encodes a cytoplasmic protein with three cytoskeletal-associated protein-glycine-conserved (CAP-GLY) domains that functions as a deubiquitinating enzyme. Mutations in this gene have been associated with cylindromatosis, multiple familial trichoepithelioma, and Brooke-Spiegler syndrome. Alternate transcriptional splice variants, encoding different isoforms, have been characterized.
Genomic Location
Associated SNPs
| SNP | Genotype | Ref. Allele | Variant Allele | Frequency | Status |
|---|---|---|---|---|---|
| rs4238818 | -- | C | A | 25.43% | No Data |
DGKI GeneCards
Genomic Location
Associated SNPs
| SNP | Genotype | Ref. Allele | Variant Allele | Frequency | Status |
|---|---|---|---|---|---|
| rs12534625 | -- | T | G | 65.18% | No Data |
DMRTA1 GeneCards
DMRT like family A1
Genomic Location
Associated SNPs
| SNP | Genotype | Ref. Allele | Variant Allele | Frequency | Status |
|---|---|---|---|---|---|
| rs13286845 | -- | A | C | 24.77% | No Data |
DNAJB1 GeneCards
DnaJ heat shock protein family (Hsp40) member B1
Genomic Location
Associated SNPs
| SNP | Genotype | Ref. Allele | Variant Allele | Frequency | Status |
|---|---|---|---|---|---|
| rs112878517 | -- | C | T | 40.22% | No Data |
EFNA4 GeneCards
This gene encodes a member of the ephrin (EPH) family. The ephrins and EPH-related receptors comprise the largest subfamily of receptor protein-tyrosine kinases and have been implicated in mediating developmental events, especially in the nervous system and in erythropoiesis. Based on their structures and sequence relationships, ephrins are divided into the ephrin-A (EFNA) class, which are anchored to the membrane by a glycosylphosphatidylinositol linkage, and the ephrin-B (EFNB) class, which are transmembrane proteins. This gene encodes an EFNA class ephrin. Three transcript variants that encode distinct proteins have been identified.
Genomic Location
Associated SNPs
| SNP | Genotype | Ref. Allele | Variant Allele | Frequency | Status |
|---|---|---|---|---|---|
| rs11589479 | -- | G | A | 17.32% | No Data |
EGR2 GeneCards
The protein encoded by this gene is a transcription factor with three tandem C2H2-type zinc fingers. Defects in this gene are associated with Charcot-Marie-Tooth disease type 1D (CMT1D), Charcot-Marie-Tooth disease type 4E (CMT4E), and with Dejerine-Sottas syndrome (DSS). Multiple transcript variants encoding two different isoforms have been found for this gene.
Genomic Location
Associated SNPs
| SNP | Genotype | Ref. Allele | Variant Allele | Frequency | Status |
|---|---|---|---|---|---|
| rs10822082 | -- | T | C | 52.72% | No Data |
FOXP1 GeneCards
This gene belongs to subfamily P of the forkhead box (FOX) transcription factor family. Forkhead box transcription factors play important roles in the regulation of tissue- and cell type-specific gene transcription during both development and adulthood. Forkhead box P1 protein contains both DNA-binding- and protein-protein binding-domains. This gene may act as a tumor suppressor as it is lost in several tumor types and maps to a chromosomal region (3p14.1) reported to contain a tumor suppressor gene(s). Alternative splicing results in multiple transcript variants encoding different isoforms. COMPLETENESS: complete on the 3' end.
Genomic Location
Associated SNPs
| SNP | Genotype | Ref. Allele | Variant Allele | Frequency | Status |
|---|---|---|---|---|---|
| rs6802472 | -- | A | G | 78.25% | No Data |
FOXP2 GeneCards
This gene encodes a member of the forkhead/winged-helix (FOX) family of transcription factors. It is expressed in fetal and adult brain as well as in several other organs such as the lung and gut. The protein product contains a FOX DNA-binding domain and a large polyglutamine tract and is an evolutionarily conserved transcription factor, which may bind directly to approximately 300 to 400 gene promoters in the human genome to regulate the expression of a variety of genes. This gene is required for proper development of speech and language regions of the brain during embryogenesis, and may be involved in a variety of biological pathways and cascades that may ultimately influence language development. Mutations in this gene cause speech-language disorder 1 (SPCH1), also known as autosomal dominant speech and language disorder with orofacial dyspraxia. Multiple alternative transcripts encoding different isoforms have been identified in this gene.
Genomic Location
Associated SNPs
| SNP | Genotype | Ref. Allele | Variant Allele | Frequency | Status |
|---|---|---|---|---|---|
| rs10228494 | -- | C | G | 44.73% | No Data |
GABRB1 GeneCards
The gamma-aminobutyric acid (GABA) A receptor is a multisubunit chloride channel that mediates the fastest inhibitory synaptic transmission in the central nervous system. This gene encodes GABA A receptor, beta 1 subunit. It is mapped to chromosome 4p12 in a cluster comprised of genes encoding alpha 4, alpha 2 and gamma 1 subunits of the GABA A receptor. Alteration of this gene is implicated in the pathogenetics of schizophrenia.
Genomic Location
Associated SNPs
| SNP | Genotype | Ref. Allele | Variant Allele | Frequency | Status |
|---|---|---|---|---|---|
| rs13116355 | -- | A | G | 66.79% | No Data |
GATA4 GeneCards
This gene encodes a member of the GATA family of zinc-finger transcription factors. Members of this family recognize the GATA motif which is present in the promoters of many genes. This protein is thought to regulate genes involved in embryogenesis and in myocardial differentiation and function, and is necessary for normal testicular development. Mutations in this gene have been associated with cardiac septal defects. Additionally, alterations in gene expression have been associated with several cancer types. Alternative splicing results in multiple transcript variants.
Genomic Location
Associated SNPs
| SNP | Genotype | Ref. Allele | Variant Allele | Frequency | Status |
|---|---|---|---|---|---|
| rs4840572 | -- | G | A | 30.18% | No Data |
GRB14 GeneCards
The product of this gene belongs to a small family of adapter proteins that are known to interact with a number of receptor tyrosine kinases and signaling molecules. This gene encodes a growth factor receptor-binding protein that interacts with insulin receptors and insulin-like growth-factor receptors. This protein likely has an inhibitory effect on receptor tyrosine kinase signaling and, in particular, on insulin receptor signaling. This gene may play a role in signaling pathways that regulate growth and metabolism. Alternative splicing results in multiple transcript variants.
Genomic Location
Associated SNPs
| SNP | Genotype | Ref. Allele | Variant Allele | Frequency | Status |
|---|---|---|---|---|---|
| rs13006079 | -- | G | A | 18.22% | No Data |
GRIN2B GeneCards
This gene encodes a member of the N-methyl-D-aspartate (NMDA) receptor family within the ionotropic glutamate receptor superfamily. The encoded protein is a subunit of the NMDA receptor ion channel which acts as an agonist binding site for glutamate. The NMDA receptors mediate a slow calcium-permeable component of excitatory synaptic transmission in the central nervous system. The NMDA receptors are heterotetramers of seven genetically encoded, differentially expressed subunits including NR1 (GRIN1), NR2 (GRIN2A, GRIN2B, GRIN2C, or GRIN2D) and NR3 (GRIN3A or GRIN3B). The early expression of this gene in development suggests a role in brain development, circuit formation, synaptic plasticity, and cellular migration and differentiation. Naturally occurring mutations within this gene are associated with neurodevelopmental disorders including autism spectrum disorder, attention deficit hyperactivity disorder, epilepsy, and schizophrenia.
Genomic Location
Associated SNPs
| SNP | Genotype | Ref. Allele | Variant Allele | Frequency | Status |
|---|---|---|---|---|---|
| rs1805508 | -- | C | G | 62.80% | No Data |
HCN1 GeneCards
The membrane protein encoded by this gene is a hyperpolarization-activated cation channel that contributes to the native pacemaker currents in heart and neurons. The encoded protein can homodimerize or heterodimerize with other pore-forming subunits to form a potassium channel. This channel may act as a receptor for sour tastes.
Genomic Location
Associated SNPs
| SNP | Genotype | Ref. Allele | Variant Allele | Frequency | Status |
|---|---|---|---|---|---|
| rs79767800 | -- | C | T | 21.29% | No Data |
HP1BP3 GeneCards
heterochromatin protein 1 binding protein 3
Genomic Location
Associated SNPs
| SNP | Genotype | Ref. Allele | Variant Allele | Frequency | Status |
|---|---|---|---|---|---|
| rs12404954 | -- | A | G | 60.59% | No Data |
KIF16B GeneCards
The protein encoded by this gene is a kinesin-like protein that may be involved in intracellular trafficking. Three transcript variants encoding different isoforms have been found for this gene.
Genomic Location
Associated SNPs
| SNP | Genotype | Ref. Allele | Variant Allele | Frequency | Status |
|---|---|---|---|---|---|
| rs6131703 | -- | A | G | 60.48% | No Data |
L3MBTL2 GeneCards
L3MBTL histone methyl-lysine binding protein 2
Genomic Location
Associated SNPs
| SNP | Genotype | Ref. Allele | Variant Allele | Frequency | Status |
|---|---|---|---|---|---|
| rs77339131 | -- | G | A | 5.98% | No Data |
LOC101927262 GeneCards
Genomic Location
Associated SNPs
| SNP | Genotype | Ref. Allele | Variant Allele | Frequency | Status |
|---|---|---|---|---|---|
| rs60843830 | -- | C | G | 66.38% | No Data |
LRFN2 GeneCards
leucine rich repeat and fibronectin type III domain containing 2
Genomic Location
Associated SNPs
| SNP | Genotype | Ref. Allele | Variant Allele | Frequency | Status |
|---|---|---|---|---|---|
| rs75108536 | -- | C | T | 16.07% | No Data |
LRP1B GeneCards
This gene encodes a member of the low density lipoprotein (LDL) receptor family. These receptors play a wide variety of roles in normal cell function and development due to their interactions with multiple ligands. Disruption of this gene has been reported in several types of cancer.
Genomic Location
Associated SNPs
| SNP | Genotype | Ref. Allele | Variant Allele | Frequency | Status |
|---|---|---|---|---|---|
| rs11900075 | -- | A | G | 86.48% | No Data |
| rs1438026 | -- | T | C | 67.21% | No Data |
LRRC4 GeneCards
This gene encodes a transcriptional co-activator that interacts with the acidic domain of Epstein-Barr virus nuclear antigen 2 (EBNA 2), a transcriptional activator that is required for B-lymphocyte transformation. Other transcription factors that interact with this protein are signal transducers and activators of transcription, STATs. This protein is also thought to be essential for normal cell growth. A similar protein in mammals and other organisms is a component of the RNA-induced silencing complex (RISC).
Genomic Location
Associated SNPs
LRRC7 GeneCards
leucine rich repeat containing 7
Genomic Location
Associated SNPs
| SNP | Genotype | Ref. Allele | Variant Allele | Frequency | Status |
|---|---|---|---|---|---|
| rs150949450 | -- | T | C | 96.04% | No Data |
MAP2 GeneCards
This gene encodes a protein that belongs to the microtubule-associated protein family. The proteins of this family are thought to be involved in microtubule assembly, which is an essential step in neurogenesis. The products of similar genes in rat and mouse are neuron-specific cytoskeletal proteins that are enriched in dentrites, implicating a role in determining and stabilizing dentritic shape during neuron development. A number of alternatively spliced variants encoding distinct isoforms have been described. COMPLETENESS: complete on the 3' end.
Genomic Location
Associated SNPs
| SNP | Genotype | Ref. Allele | Variant Allele | Frequency | Status |
|---|---|---|---|---|---|
| rs6743594 | -- | A | G | 29.93% | No Data |
MDFIC GeneCards
This gene product is a member of a family of proteins characterized by a specific cysteine-rich C-terminal domain, which is involved in transcriptional regulation of viral genome expression. Alternative translation initiation from an upstream non-AUG (GUG), and an in-frame, downstream AUG codon, results in the production of two isoforms, p40 and p32, respectively, which have different subcellular localization
Genomic Location
Associated SNPs
| SNP | Genotype | Ref. Allele | Variant Allele | Frequency | Status |
|---|---|---|---|---|---|
| rs10251192 | -- | C | T | 54.73% | No Data |
MFHAS1 GeneCards
Identified in a human 8p amplicon, this gene is a potential oncogene whose expression is enhanced in some malignant fibrous histiocytomas (MFH). The primary structure of its product includes an ATP/GTP-binding site, three leucine zipper domains, and a leucine-rich tandem repeat, which are structural or functional elements for interactions among proteins related to the cell cycle, and which suggest that overexpression might be oncogenic with respect to MFH.
Genomic Location
Associated SNPs
| SNP | Genotype | Ref. Allele | Variant Allele | Frequency | Status |
|---|---|---|---|---|---|
| rs2409095 | -- | T | A | 75.14% | No Data |
MTMR9 GeneCards
myotubularin related protein 9
Genomic Location
Associated SNPs
| SNP | Genotype | Ref. Allele | Variant Allele | Frequency | Status |
|---|---|---|---|---|---|
| rs7814131 | -- | T | G | 53.66% | No Data |
| rs10085919 | -- | A | A | 85.19% | No Data |
MVB12B GeneCards
The protein encoded by this gene is a component of the ESCRT-I complex, a heterotetramer, which mediates the sorting of ubiquitinated cargo protein from the plasma membrane to the endosomal vesicle. ESCRT-I complex plays an essential role in HIV budding and endosomal protein sorting. Depletion and overexpression of this and related protein (MVB12A) inhibit HIV-1 infectivity and induce unusual viral assembly defects, indicating a role for MVB12 subunits in regulating ESCRT-mediated virus budding. Alternatively spliced transcript variants encoding different isoforms have been found for this gene.
Genomic Location
Associated SNPs
| SNP | Genotype | Ref. Allele | Variant Allele | Frequency | Status |
|---|---|---|---|---|---|
| rs10987266 | -- | C | T | 6.10% | No Data |
MYT1L GeneCards
This gene encodes a member of the zinc finger superfamily of transcription factors whose expression, thus far, has been found only in neuronal tissues. The encoded protein belongs to a novel class of cystein-cystein-histidine-cystein zinc finger proteins that function in the developing mammalian central nervous system. Forced expression of this gene in combination with the basic helix-loop-helix transcription factor NeuroD1 and the transcription factors POU class 3 homeobox 2 and achaete-scute family basic helix-loop-helix transcription factor 1 can convert fetal and postnatal human fibroblasts into induced neuronal cells, which are able to generate action potentials. Mutations in this gene have been associated with an autosomal dominant form of cognitive disability and with autism spectrum disorder. Alternative splicing results in multiple variants.
Genomic Location
Associated SNPs
| SNP | Genotype | Ref. Allele | Variant Allele | Frequency | Status |
|---|---|---|---|---|---|
| rs61595816 | -- | A | C | 84.89% | No Data |
NEO1 GeneCards
This gene encodes a cell surface protein that is a member of the immunoglobulin superfamily. The encoded protein consists of four N-terminal immunoglobulin-like domains, six fibronectin type III domains, a transmembrane domain and a C-terminal internal domain that shares homology with the tumor suppressor candidate gene DCC. This protein may be involved in cell growth and differentiation and in cell-cell adhesion. Defects in this gene are associated with cell proliferation in certain cancers. Alternate splicing results in multiple transcript variants.
Genomic Location
Associated SNPs
| SNP | Genotype | Ref. Allele | Variant Allele | Frequency | Status |
|---|---|---|---|---|---|
| rs983067 | -- | T | C | 35.35% | No Data |
NF1 GeneCards
This gene product appears to function as a negative regulator of the ras signal transduction pathway. Mutations in this gene have been linked to neurofibromatosis type 1, juvenile myelomonocytic leukemia and Watson syndrome. The mRNA for this gene is subject to RNA editing (CGA>UGA->Arg1306Term) resulting in premature translation termination. Alternatively spliced transcript variants encoding different isoforms have also been described for this gene.
Genomic Location
Associated SNPs
| SNP | Genotype | Ref. Allele | Variant Allele | Frequency | Status |
|---|---|---|---|---|---|
| rs2905804 | -- | T | C | 28.23% | No Data |
NLGN1 GeneCards
This gene encodes a member of a family of neuronal cell surface proteins. Members of this family may act as splice site-specific ligands for beta-neurexins and may be involved in the formation and remodeling of central nervous system synapses.
Genomic Location
Associated SNPs
| SNP | Genotype | Ref. Allele | Variant Allele | Frequency | Status |
|---|---|---|---|---|---|
| rs963349 | -- | G | C | 26.16% | No Data |
NR2F2 GeneCards
This gene encodes a member of the steroid thyroid hormone superfamily of nuclear receptors. The encoded protein is a ligand inducible transcription factor that is involved in the regulation of many different genes. Alternate splicing results in multiple transcript variants.
Genomic Location
Associated SNPs
| SNP | Genotype | Ref. Allele | Variant Allele | Frequency | Status |
|---|---|---|---|---|---|
| rs72762188 | -- | A | G | 80.23% | No Data |
OTOL1 GeneCards
Genomic Location
Associated SNPs
| SNP | Genotype | Ref. Allele | Variant Allele | Frequency | Status |
|---|---|---|---|---|---|
| rs73021449 | -- | G | A | 35.79% | No Data |
PCDH7 GeneCards
protocadherin 7
Genomic Location
Associated SNPs
| SNP | Genotype | Ref. Allele | Variant Allele | Frequency | Status |
|---|---|---|---|---|---|
| rs73108238 | -- | C | T | 24.24% | No Data |
| rs73219118 | -- | T | C | 65.55% | No Data |
PHC2 GeneCards
polyhomeotic homolog 2
Genomic Location
Associated SNPs
| SNP | Genotype | Ref. Allele | Variant Allele | Frequency | Status |
|---|---|---|---|---|---|
| rs55745410 | -- | A | G | 64.24% | No Data |
PHF21A GeneCards
PHD finger protein 21A
Genomic Location
Associated SNPs
| SNP | Genotype | Ref. Allele | Variant Allele | Frequency | Status |
|---|---|---|---|---|---|
| rs56852527 | -- | C | T | 19.80% | No Data |
PMCH GeneCards
pro-melanin concentrating hormone
Genomic Location
Associated SNPs
| SNP | Genotype | Ref. Allele | Variant Allele | Frequency | Status |
|---|---|---|---|---|---|
| rs11111197 | -- | C | T | 20.03% | No Data |
PTCH1 GeneCards
This gene encodes a member of the patched family of proteins and a component of the hedgehog signaling pathway. Hedgehog signaling is important in embryonic development and tumorigenesis. The encoded protein is the receptor for the secreted hedgehog ligands, which include sonic hedgehog, indian hedgehog and desert hedgehog. Following binding by one of the hedgehog ligands, the encoded protein is trafficked away from the primary cilium, relieving inhibition of the G-protein-coupled receptor smoothened, which results in activation of downstream signaling. Mutations of this gene have been associated with basal cell nevus syndrome and holoprosencephaly.
Genomic Location
Associated SNPs
| SNP | Genotype | Ref. Allele | Variant Allele | Frequency | Status |
|---|---|---|---|---|---|
| rs73529860 | -- | C | T | 11.84% | No Data |
PTPRF GeneCards
The protein encoded by this gene is a member of the protein tyrosine phosphatase (PTP) family. PTPs are known to be signaling molecules that regulate a variety of cellular processes including cell growth, differentiation, mitotic cycle, and oncogenic transformation. This PTP possesses an extracellular region, a single transmembrane region, and two tandem intracytoplasmic catalytic domains, and thus represents a receptor-type PTP. The extracellular region contains three Ig-like domains, and nine non-Ig like domains similar to that of neural-cell adhesion molecule. This PTP was shown to function in the regulation of epithelial cell-cell contacts at adherents junctions, as well as in the control of beta-catenin signaling. An increased expression level of this protein was found in the insulin-responsive tissue of obese, insulin-resistant individuals, and may contribute to the pathogenesis of insulin resistance. Two alternatively spliced transcript variants of this gene, which encode distinct proteins, have been reported.
Genomic Location
Associated SNPs
| SNP | Genotype | Ref. Allele | Variant Allele | Frequency | Status |
|---|---|---|---|---|---|
| rs10789436 | -- | T | G | 22.00% | No Data |
RARB GeneCards
This gene encodes retinoic acid receptor beta, a member of the thyroid-steroid hormone receptor superfamily of nuclear transcriptional regulators. This receptor localizes to the cytoplasm and to subnuclear compartments. It binds retinoic acid, the biologically active form of vitamin A which mediates cellular signalling in embryonic morphogenesis, cell growth and differentiation. It is thought that this protein limits growth of many cell types by regulating gene expression. The gene was first identified in a hepatocellular carcinoma where it flanks a hepatitis B virus integration site. Alternate promoter usage and differential splicing result in multiple transcript variants.
Genomic Location
Associated SNPs
| SNP | Genotype | Ref. Allele | Variant Allele | Frequency | Status |
|---|---|---|---|---|---|
| rs4858708 | -- | A | T | 51.61% | No Data |
RASGRF2 GeneCards
RAS GTPases cycle between an inactive GDP-bound state and an active GTP-bound state. This gene encodes a calcium-regulated nucleotide exchange factor activating both RAS and RAS-related protein, RAC1, through the exchange of bound GDP for GTP, thereby, coordinating the signaling of distinct mitogen-activated protein kinase pathways.
Genomic Location
Associated SNPs
| SNP | Genotype | Ref. Allele | Variant Allele | Frequency | Status |
|---|---|---|---|---|---|
| rs12520354 | -- | G | A | 26.13% | No Data |
| rs191780 | -- | C | G | 84.22% | No Data |
REST GeneCards
This gene was initially identified as a transcriptional repressor that represses neuronal genes in non-neuronal tissues. However, depending on the cellular context, this gene can act as either an oncogene or a tumor suppressor. The encoded protein is a member of the Kruppel-type zinc finger transcription factor family. It represses transcription by binding a DNA sequence element called the neuron-restrictive silencer element. The protein is also found in undifferentiated neuronal progenitor cells and it is thought that this repressor may act as a master negative regulator of neurogenesis. Alternatively spliced transcript variants have been described.
Genomic Location
Associated SNPs
| SNP | Genotype | Ref. Allele | Variant Allele | Frequency | Status |
|---|---|---|---|---|---|
| rs4276341 | -- | C | T | 33.85% | No Data |
SALL1 GeneCards
The protein encoded by this gene is a zinc finger transcriptional repressor and may be part of the NuRD histone deacetylase complex (HDAC). Defects in this gene are a cause of Townes-Brocks syndrome (TBS) as well as bronchio-oto-renal syndrome (BOR). Two transcript variants encoding different isoforms have been found for this gene.
Genomic Location
Associated SNPs
| SNP | Genotype | Ref. Allele | Variant Allele | Frequency | Status |
|---|---|---|---|---|---|
| rs35287272 | -- | C | T | 29.08% | No Data |
SATB1 GeneCards
This gene encodes a matrix protein which binds nuclear matrix and scaffold-associating DNAs through a unique nuclear architecture. The protein recruits chromatin-remodeling factors in order to regulate chromatin structure and gene expression. COMPLETENESS: complete on the 3' end.
Genomic Location
Associated SNPs
| SNP | Genotype | Ref. Allele | Variant Allele | Frequency | Status |
|---|---|---|---|---|---|
| rs13090941 | -- | G | A | 49.53% | No Data |
| rs4473575 | -- | G | T | 92.81% | No Data |
SDK1 GeneCards
The protein encoded by this gene is a member of the immunoglobulin superfamily. The protein contains six immunoglobulin-like domains and thirteen fibronectin type III domains. Fibronectin type III domains are present in both extracellular and intracellular proteins and tandem repeats are known to contain binding sites for DNA, heparin and the cell surface. Alternative splicing results in multiple transcript variants.
Genomic Location
Associated SNPs
| SNP | Genotype | Ref. Allele | Variant Allele | Frequency | Status |
|---|---|---|---|---|---|
| rs6962750 | -- | T | C | 79.22% | No Data |
SIX3 GeneCards
This gene encodes a member of the sine oculis homeobox transcription factor family. The encoded protein plays a role in eye development. Mutations in this gene have been associated with holoprosencephaly type 2.
Genomic Location
Associated SNPs
| SNP | Genotype | Ref. Allele | Variant Allele | Frequency | Status |
|---|---|---|---|---|---|
| rs534567 | -- | A | G | 41.17% | No Data |
SLC16A7 GeneCards
solute carrier family 16 member 7
Genomic Location
Associated SNPs
| SNP | Genotype | Ref. Allele | Variant Allele | Frequency | Status |
|---|---|---|---|---|---|
| rs2654670 | -- | A | C | 57.76% | No Data |
| rs75478074 | -- | C | T | 24.25% | No Data |
SLC24A2 GeneCards
This gene encodes a member of the calcium/cation antiporter superfamily of transport proteins. The encoded protein belongs to the SLC24 branch of exchangers, which can mediate the extrusion of one Ca2+ ion and one K+ ion in exchange for four Na+ ions. This family member is a retinal cone/brain exchanger that can mediate a light-induced decrease in free Ca2+ concentration. This protein may also play a neuroprotective role during ischemic brain injury. Alternative splicing results in multiple transcript variants.
Genomic Location
Associated SNPs
| SNP | Genotype | Ref. Allele | Variant Allele | Frequency | Status |
|---|---|---|---|---|---|
| rs7036637 | -- | G | C | 37.20% | No Data |
SLC24A5 GeneCards
This gene is a member of the potassium-dependent sodium/calcium exchanger family and encodes an intracellular membrane protein with 2 large hydrophilic loops and 2 sets of multiple transmembrane-spanning segments. Sequence variation in this gene has been associated with differences in skin pigmentation.
Genomic Location
Associated SNPs
| SNP | Genotype | Ref. Allele | Variant Allele | Frequency | Status |
|---|---|---|---|---|---|
| rs869730 | -- | G | A | 39.43% | No Data |
SLC35G2 GeneCards
Genomic Location
Associated SNPs
| SNP | Genotype | Ref. Allele | Variant Allele | Frequency | Status |
|---|---|---|---|---|---|
| rs55749418 | -- | G | A | 9.02% | No Data |
SLC39A8 GeneCards
This gene encodes a member of the SLC39 family of solute-carrier genes, which show structural characteristics of zinc transporters. The encoded protein is glycosylated and found in the plasma membrane and mitochondria, and functions in the cellular import of zinc at the onset of inflammation. It is also thought to be the primary transporter of the toxic cation cadmium, which is found in cigarette smoke. Multiple transcript variants encoding different isoforms have been found for this gene. Additional alternatively spliced transcript variants of this gene have been described, but their full-length nature is not known.
Genomic Location
Associated SNPs
| SNP | Genotype | Ref. Allele | Variant Allele | Frequency | Status |
|---|---|---|---|---|---|
| rs13135092 | -- | A | G | 91.19% | No Data |
SPRY2 GeneCards
This gene encodes a protein belonging to the sprouty family. The encoded protein contains a carboxyl-terminal cysteine-rich domain essential for the inhibitory activity on receptor tyrosine kinase signaling proteins and is required for growth factor stimulated translocation of the protein to membrane ruffles. In primary dermal endothelial cells this gene is transiently upregulated in response to fibroblast growth factor two. This protein is indirectly involved in the non-cell autonomous inhibitory effect on fibroblast growth factor two signaling. The protein interacts with Cas-Br-M (murine) ectropic retroviral transforming sequence, and can function as a bimodal regulator of epidermal growth factor receptor/mitogen-activated protein kinase signaling. This protein may play a role in alveoli branching during lung development as shown by a similar mouse protein.
Genomic Location
Associated SNPs
| SNP | Genotype | Ref. Allele | Variant Allele | Frequency | Status |
|---|---|---|---|---|---|
| rs524278 | -- | T | G | 72.55% | No Data |
STPG2 GeneCards
Genomic Location
Associated SNPs
| SNP | Genotype | Ref. Allele | Variant Allele | Frequency | Status |
|---|---|---|---|---|---|
| rs11933823 | -- | G | C | 31.88% | No Data |
TAX1BP1 GeneCards
This gene encodes a HTLV-1 tax1 binding protein. The encoded protein interacts with TNFAIP3, and inhibits TNF-induced apoptosis by mediating the TNFAIP3 anti-apoptotic activity. Degradation of this protein by caspase-3-like family proteins is associated with apoptosis induced by TNF. This protein may also have a role in the inhibition of inflammatory signaling pathways. Alternatively spliced transcript variants encoding different isoforms have been found for this gene.
Genomic Location
Associated SNPs
| SNP | Genotype | Ref. Allele | Variant Allele | Frequency | Status |
|---|---|---|---|---|---|
| rs2391448 | -- | C | T | 73.13% | No Data |
TCF4 GeneCards
This gene encodes transcription factor 4, a basic helix-loop-helix transcription factor. The encoded protein recognizes an Ephrussi-box ('E-box') binding site ('CANNTG') - a motif first identified in immunoglobulin enhancers. This gene is broadly expressed, and may play an important role in nervous system development. Defects in this gene are a cause of Pitt-Hopkins syndrome. In addition, an intronic CTG repeat normally numbering 10-37 repeat units can expand to >50 repeat units and cause Fuchs endothelial corneal dystrophy. Multiple alternatively spliced transcript variants that encode different proteins have been described.
Genomic Location
Associated SNPs
TET2 GeneCards
The protein encoded by this gene is a methylcytosine dioxygenase that catalyzes the conversion of methylcytosine to 5-hydroxymethylcytosine. The encoded protein is involved in myelopoiesis, and defects in this gene have been associated with several myeloproliferative disorders. Two variants encoding different isoforms have been found for this gene.
Genomic Location
Associated SNPs
| SNP | Genotype | Ref. Allele | Variant Allele | Frequency | Status |
|---|---|---|---|---|---|
| rs2133086 | -- | A | C | 48.12% | No Data |
TSHZ3 GeneCards
This gene encodes a zinc-finger transcription factor that regulates smooth muscle cell differentiation in the developing urinary tract. Consistent with this role, mice in which this gene has been inactivated exhibit abnormal gene expression in urinary tract smooth muscle cell precursors and kidney defects including hydronephrosis. The encoded transcription factor comprises a gene silencing complex that inhibits caspase expression. Reduced expression of this gene and consequent caspase upregulation may be correlated with progression of Alzheimer's disease in human patients.
Genomic Location
Associated SNPs
| SNP | Genotype | Ref. Allele | Variant Allele | Frequency | Status |
|---|---|---|---|---|---|
| rs67361341 | -- | C | A | 37.87% | No Data |
TSNARE1 GeneCards
t-SNARE domain containing 1
Genomic Location
Associated SNPs
| SNP | Genotype | Ref. Allele | Variant Allele | Frequency | Status |
|---|---|---|---|---|---|
| rs34819186 | -- | A | C | 54.63% | No Data |
VGLL3 GeneCards
Genomic Location
Associated SNPs
| SNP | Genotype | Ref. Allele | Variant Allele | Frequency | Status |
|---|---|---|---|---|---|
| rs6790538 | -- | G | C | 55.03% | No Data |
| rs4605551 | -- | T | C | 63.66% | No Data |
| rs139162753 | -- | T | G | 99.64% | No Data |
ZBTB20 GeneCards
This gene, which was initially designated as dendritic cell-derived BTB/POZ zinc finger (DPZF), belongs to a family of transcription factors with an N-terminal BTB/POZ domain and a C-terminal DNA-bindng zinc finger domain. The BTB/POZ domain is a hydrophobic region of approximately 120 aa which mediates association with other BTB/POZ domain-containing proteins. This gene acts as a transcriptional repressor and plays a role in many processes including neurogenesis, glucose homeostasis, and postnatal growth. Mutations in this gene have been associated with Primrose syndrome as well as the 3q13.31 microdeletion syndrome. Alternative splicing results in multiple transcript variants encoding distinct isoforms.
Genomic Location
Associated SNPs
ZEB2 GeneCards
The protein encoded by this gene is a member of the Zfh1 family of 2-handed zinc finger/homeodomain proteins. It is located in the nucleus and functions as a DNA-binding transcriptional repressor that interacts with activated SMADs. Mutations in this gene are associated with Hirschsprung disease/Mowat-Wilson syndrome. Alternatively spliced transcript variants have been found for this gene.
Genomic Location
Associated SNPs
| SNP | Genotype | Ref. Allele | Variant Allele | Frequency | Status |
|---|---|---|---|---|---|
| rs786247 | -- | G | A | 64.15% | No Data |
These are the genetic markers (SNPs) analyzed for this trait. Variations detected in your genome are listed under the "Genotype" column. SNPs showing "--" were not identified in your DNA file.
| SNP | Chromosome | Genotype | Variant Allele | Frequency |
|---|---|---|---|---|
| rs2813711 | 1 | GG | G | 15.82% |
| rs2953329 | 1 | GA | A | 59.40% |
| rs1694933 | 3 | CA | A | 48.57% |
| rs490434 | 4 | GG | G | 42.14% |
| rs6858066 | 4 | AG | G | 48.35% |
| rs10067113 | 5 | CT | T | 62.27% |
| rs9345268 | 6 | CT | T | 31.94% |
| rs1884123 | 6 | GG | G | 36.14% |
| rs10817520 | 9 | CT | T | 34.26% |
| rs7076367 | 10 | TC | C | 60.35% |
| rs704660 | 11 | CT | T | 40.44% |
| rs10160758 | 11 | CC | C | 73.09% |
| rs2239030 | 12 | GA | A | 42.90% |
| rs1927860 | 13 | AC | C | 60.09% |
| rs2238199 | 14 | AA | A | 44.53% |
| rs1393840 | 14 | CT | T | 40.69% |
| rs17260689 | 16 | TT | T | 30.15% |
| rs6505239 | 17 | GG | G | 13.48% |
| rs2752914 | 20 | CC | C | 59.66% |
| rs55745410 | 1 | -- | G | 64.24% |
| rs71637264 | 1 | -- | G | 81.82% |
| rs55817211 | 1 | -- | T | 30.07% |
| rs734073 | 1 | -- | C | 75.50% |
| rs2229868 | 1 | -- | T | 20.90% |
| rs150949450 | 1 | -- | C | 96.04% |
| rs10789436 | 1 | -- | G | 22.00% |
| rs2885697 | 1 | -- | T | 66.92% |
| rs638722 | 1 | -- | C | 82.08% |
| rs11589479 | 1 | -- | A | 17.32% |
| rs984983 | 1 | -- | T | 86.79% |
| rs12023775 | 1 | -- | T | 64.43% |
| rs11240317 | 1 | -- | C | 29.87% |
| rs12404954 | 1 | -- | G | 60.59% |
| rs941520 | -- | C | 49.75% | |
| rs6576855 | 1 | -- | C | 45.33% |
| rs13023277 | 2 | -- | G | 66.18% |
| rs307984 | 2 | -- | T | 14.05% |
| rs13006079 | 2 | -- | A | 18.22% |
| rs77915397 | 2 | -- | G | 93.20% |
| rs534567 | 2 | -- | G | 41.17% |
| rs786247 | 2 | -- | A | 64.15% |
| rs11900075 | 2 | -- | G | 86.48% |
| rs61595816 | 2 | -- | C | 84.89% |
| rs6743594 | 2 | -- | G | 29.93% |
| rs6756470 | 2 | -- | T | 28.70% |
| rs1438026 | 2 | -- | C | 67.21% |
| rs60843830 | 2 | -- | G | 66.38% |
| rs13090941 | 3 | -- | A | 49.53% |
| rs55749418 | 3 | -- | A | 9.02% |
| rs116275905 | 3 | -- | A | 4.89% |
| rs78841189 | 3 | -- | A | 13.36% |
| rs73021449 | 3 | -- | A | 35.79% |
| rs6807234 | 3 | -- | A | 19.12% |
| rs1472302 | 3 | -- | T | 47.65% |
| rs6802472 | 3 | -- | G | 78.25% |
| rs10433500 | 3 | -- | A | 63.21% |
| rs4473575 | 3 | -- | T | 92.81% |
| rs2722012 | 3 | -- | A | 18.74% |
| rs76363701 | 3 | -- | C | 95.10% |
| rs7653193 | 3 | -- | A | 31.70% |
| rs7645787 | 3 | -- | T | 0.29% |
| rs1606492 | 3 | -- | C | 61.01% |
| rs11710504 | 3 | -- | G | 93.11% |
| rs6790538 | 3 | -- | C | 55.03% |
| rs4605551 | 3 | -- | C | 63.66% |
| rs963349 | 3 | -- | C | 26.16% |
| rs1388479 | 3 | -- | T | 29.89% |
| rs139162753 | 3 | -- | G | 99.64% |
| rs73130739 | 3 | -- | C | 98.35% |
| rs73132375 | 3 | -- | G | 87.43% |
| rs67379620 | 3 | -- | T | 15.49% |
| rs1988552 | 3 | -- | G | 9.34% |
| rs4858708 | 3 | -- | T | 51.61% |
| rs331949 | 4 | -- | C | 62.34% |
| rs4276341 | 4 | -- | T | 33.85% |
| rs62322696 | 4 | -- | A | 45.00% |
| rs11933823 | 4 | -- | C | 31.88% |
| rs13135092 | 4 | -- | G | 91.19% |
| rs2133086 | 4 | -- | C | 48.12% |
| rs73108238 | 4 | -- | T | 24.24% |
| rs13116355 | 4 | -- | G | 66.79% |
| rs73219118 | 4 | -- | C | 65.55% |
| rs2173934 | 5 | -- | G | 40.76% |
| rs4836094 | 5 | -- | T | 41.57% |
| rs79767800 | 5 | -- | T | 21.29% |
| rs7732733 | 5 | -- | G | 79.66% |
| rs12520354 | 5 | -- | A | 26.13% |
| rs10061911 | 5 | -- | T | 65.82% |
| rs6897129 | 5 | -- | A | 66.78% |
| rs191780 | 5 | -- | G | 84.22% |
| rs1991797 | 5 | -- | T | 32.54% |
| rs9360234 | 6 | -- | A | 23.27% |
| rs75108536 | 6 | -- | T | 16.07% |
| rs513150 | 7 | -- | A | 65.26% |
| rs10228494 | 7 | -- | G | 44.73% |
| rs6465607 | 7 | -- | C | 51.82% |
| rs10251192 | 7 | -- | T | 54.73% |
| rs720300 | 7 | -- | G | 87.41% |
| rs12534625 | 7 | -- | G | 65.18% |
| rs3808072 | 7 | -- | T | 26.23% |
| rs2391448 | 7 | -- | T | 73.13% |
| rs117928826 | 7 | -- | G | 96.36% |
| rs6962750 | 7 | -- | C | 79.22% |
| rs28646179 | 8 | -- | A | 5.32% |
| rs62519839 | 8 | -- | T | 11.21% |
| rs7814131 | 8 | -- | G | 53.66% |
| rs4840572 | 8 | -- | A | 30.18% |
| rs10085919 | 8 | -- | A | 85.19% |
| rs2409095 | 8 | -- | A | 75.14% |
| rs2409652 | 8 | -- | T | 25.66% |
| rs34819186 | 8 | -- | C | 54.63% |
| rs4734500 | 8 | -- | T | 60.74% |
| rs4961705 | 9 | -- | C | 34.94% |
| rs4961729 | 9 | -- | G | 78.29% |
| rs7036637 | 9 | -- | C | 37.20% |
| rs13286845 | 9 | -- | C | 24.77% |
| rs4836927 | 9 | -- | C | 68.61% |
| rs73529860 | 9 | -- | T | 11.84% |
| rs1341729 | 9 | -- | T | 29.62% |
| rs10987266 | 9 | -- | T | 6.10% |
| rs1492436 | 10 | -- | C | 83.52% |
| rs10822082 | 10 | -- | C | 52.72% |
| rs8181326 | 10 | -- | A | 64.95% |
| rs1171832 | 10 | -- | G | 51.36% |
| rs35377646 | 10 | -- | G | 83.64% |
| rs4576809 | 11 | -- | A | 9.45% |
| rs4938247 | 11 | -- | G | 71.45% |
| rs1616065 | 11 | -- | C | 45.96% |
| rs56852527 | 11 | -- | T | 19.80% |
| rs10767869 | 11 | -- | A | 31.87% |
| rs11111197 | 12 | -- | T | 20.03% |
| rs1805508 | 12 | -- | G | 62.80% |
| rs11047498 | 12 | -- | C | 38.72% |
| rs7136732 | 12 | -- | G | 80.79% |
| rs2654670 | 12 | -- | C | 57.76% |
| rs75478074 | 12 | -- | T | 24.25% |
| rs524278 | 13 | -- | G | 72.55% |
| rs9556958 | 13 | -- | T | 52.02% |
| rs17700977 | 14 | -- | A | 40.69% |
| rs72762188 | 15 | -- | G | 80.23% |
| rs869730 | 15 | -- | A | 39.43% |
| rs983067 | 15 | -- | C | 35.35% |
| rs117167357 | 16 | -- | T | 93.09% |
| rs2071390 | 16 | -- | T | 15.91% |
| rs2071342 | 16 | -- | C | 64.35% |
| rs4238818 | 16 | -- | A | 25.43% |
| rs17201148 | 16 | -- | G | 42.12% |
| rs6500948 | 16 | -- | A | 82.11% |
| rs35287272 | 16 | -- | T | 29.08% |
| rs1319994 | 16 | -- | C | 59.47% |
| rs116920450 | 17 | -- | A | 1.36% |
| rs8078436 | 17 | -- | T | 44.63% |
| rs149418624 | 17 | -- | A | 23.35% |
| rs4792735 | 17 | -- | A | 53.57% |
| rs8080657 | 17 | -- | G | 55.66% |
| rs2905804 | 17 | -- | C | 28.23% |
| rs198535 | 17 | -- | G | 58.48% |
| rs812738 | 18 | -- | C | 66.63% |
| rs2919451 | 18 | -- | T | 39.12% |
| rs112878517 | 19 | -- | T | 40.22% |
| rs67361341 | 19 | -- | A | 37.87% |
| rs6512302 | 20 | -- | C | 74.61% |
| rs16998583 | 20 | -- | G | 82.60% |
| rs6131703 | 20 | -- | G | 60.48% |
| rs240619 | 22 | -- | G | 55.27% |
| rs77339131 | 22 | -- | A | 5.98% |
| rs139498 | 22 | -- | C | 44.70% |
The following peer-reviewed scientific studies support the genetic associations analyzed in this report.
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