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GWAS Study

Phosphodiesterase 8B gene variants are associated with serum TSH levels and thyroid function.

Arnaud-Lopez L, Usala G, Ceresini G et al.

18514160 PubMed ID
GWAS Study Type
8463 Participants
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Chapter I

Publication Details

Comprehensive information about this research publication

Authors

AL
Arnaud-Lopez L
UG
Usala G
CG
Ceresini G
MB
Mitchell BD
PM
Pilia MG
PM
Piras MG
SN
Sestu N
MA
Maschio A
BF
Busonero F
AG
Albai G
DM
Dei M
LS
Lai S
MA
Mulas A
CL
Crisponi L
TT
Tanaka T
BS
Bandinelli S
GJ
Guralnik JM
LA
Loi A
BL
Balaci L
SG
Sole G
PA
Prinzis A
MS
Mariotti S
SA
Shuldiner AR
CA
Cao A
SD
Schlessinger D
UM
Uda M
AG
Abecasis GR
NR
Nagaraja R
SS
Sanna S
NS
Naitza S
Chapter II

Abstract

Summary of the research findings

Thyroid-stimulating hormone (TSH) controls thyroid growth and hormone secretion through binding to its G protein-coupled receptor (TSHR) and production of cyclic AMP (cAMP). Serum TSH is a sensitive indicator of thyroid function, and overt abnormalities in thyroid function lead to common endocrine disorders affecting approximately 10% of individuals over a life span. By genotyping 362,129 SNPs in 4,300 Sardinians, we identified a strong association (p = 1.3 x 10(-11)) between alleles of rs4704397 and circulating TSH levels; each additional copy of the minor A allele was associated with an increase of 0.13 muIU/ml in TSH. The single-nucleotide polymorphism (SNP) is located in intron 1 of PDE8B, encoding a high-affinity cAMP-specific phosphodiesterase. The association was replicated in 4,158 individuals, including additional Sardinians and two genetically distant cohorts from Tuscany and the Old Order Amish (overall p value = 1.9 x 10(-20)). In addition to association of TSH levels with SNPs in PDE8B, our genome scan provided evidence for association with PDE10A and several biologically interesting candidates in a focused analysis of 24 genes. In particular, we found evidence for association of TSH levels with SNPs in the THRB (rs1505287, p = 7.3 x 10(-5)), GNAQ (rs10512065, p = 2.0 x 10(-4)), TG (rs2252696, p = 2.2 x 10(-3)), POU1F1 (rs1976324, p = 3.9 x 10(-3)), PDE4D (rs27178, p = 8.3 x 10(-3)), and TSHR (rs4903957, p = 8.6 x 10(-3)) loci. Overall, the results suggest a primary effect of PDE8B variants on cAMP levels in the thyroid. This would affect production of T4 and T3 and feedback to alter TSH release by the pituitary. PDE8B may thus provide a candidate target for the treatment of thyroid dysfunction.

4,300 Sardinian indivduals

Chapter III

Study Statistics

Key metrics and study information

8463
Total Participants
GWAS
Study Type
Yes
Replicated
1,164 European ancestry individuals, 1,136 Old Order Amish individuals, 1,858 Sardinian individuals
Replication Participants
European
Ancestry
U.S., Italy
Recruitment Country
Chapter IV

Analysis

Comprehensive review of health and genetic findings

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