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GWAS Study

A genome-wide association study suggests that a locus within the ataxin 2 binding protein 1 gene is associated with hand osteoarthritis: the Treat-OA consortium.

Zhai G, van Meurs JB, Livshits G et al.

19508968 PubMed ID
GWAS Study Type
5070 Participants
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Chapter I

Publication Details

Comprehensive information about this research publication

Authors

ZG
Zhai G
VM
van Meurs JB
LG
Livshits G
MI
Meulenbelt I
VA
Valdes AM
SN
Soranzo N
HD
Hart D
ZF
Zhang F
KB
Kato BS
RJ
Richards JB
WF
Williams FM
IM
Inouye M
KM
Kloppenburg M
DP
Deloukas P
SE
Slagboom E
UA
Uitterlinden A
ST
Spector TD
Chapter II

Abstract

Summary of the research findings

To identify the susceptibility gene in hand osteoarthritis (OA) the authors used a two-stage approach genome-wide association study using two discovery samples (the TwinsUK cohort and the Rotterdam discovery subset; a total of 1804 subjects) and four replication samples (the Chingford Study, the Chuvasha Skeletal Aging Study, the Rotterdam replication subset and the Genetics, Arthrosis, and Progression (GARP) Study; a total of 3266 people). Five single-nucleotide polymorphisms (SNPs) had a likelihood of association with hand OA in the discovery stage and one of them (rs716508), was successfully confirmed in the replication stage (meta-analysis p = 1.81x10(-5)). The C allele conferred a reduced risk of 33% to 41% using a case-control definition. The SNP is located in intron 1 of the A2BP1 gene. This study also found that the same allele of the SNP significantly reduced bone density at both the hip and spine (p<0.01), suggesting the potential mechanism of the gene in hand OA might be via effects on subchondral bone. The authors' findings provide a potential new insight into genetic mechanisms in the development of hand OA.

1,804 European ancestry individuals

Chapter III

Study Statistics

Key metrics and study information

5070
Total Participants
GWAS
Study Type
Yes
Replicated
3,266 European ancestry individuals
Replication Participants
European
Ancestry
U.K., Russian Federation, Netherlands
Recruitment Country
Chapter IV

Analysis

Comprehensive review of health and genetic findings

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