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GWAS Study

Genetic variation in SCN10A influences cardiac conduction.

Chambers JC, Zhao J, Terracciano CM et al.

20062061 PubMed ID
GWAS Study Type
18156 Participants
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Chapter I

Publication Details

Comprehensive information about this research publication

Authors

CJ
Chambers JC
ZJ
Zhao J
TC
Terracciano CM
BC
Bezzina CR
ZW
Zhang W
KR
Kaba R
NM
Navaratnarajah M
LA
Lotlikar A
SJ
Sehmi JS
KM
Kooner MK
DG
Deng G
SU
Siedlecka U
PS
Parasramka S
EI
El-Hamamsy I
WM
Wass MN
DL
Dekker LR
DJ
de Jong JS
SM
Sternberg MJ
MW
McKenna W
SN
Severs NJ
DS
de Silva R
WA
Wilde AA
AP
Anand P
YM
Yacoub M
SJ
Scott J
EP
Elliott P
WJ
Wood JN
KJ
Kooner JS
Chapter II

Abstract

Summary of the research findings

To identify genetic factors influencing cardiac conduction, we carried out a genome-wide association study of electrocardiographic time intervals in 6,543 Indian Asians. We identified association of a nonsynonymous SNP, rs6795970, in SCN10A (P = 2.8 x 10(-15)) with PR interval, a marker of cardiac atrioventricular conduction. Replication testing among 6,243 Indian Asians and 5,370 Europeans confirmed that rs6795970 (G>A) is associated with prolonged cardiac conduction (longer P-wave duration, PR interval and QRS duration, P = 10(-5) to 10(-20)). SCN10A encodes Na(V)1.8, a sodium channel. We show that SCN10A is expressed in mouse and human heart tissue and that PR interval is shorter in Scn10a(-/-) mice than in wild-type mice. We also find that rs6795970 is associated with a higher risk of heart block (P < 0.05) and a lower risk of ventricular fibrillation (P = 0.01). Our findings provide new insight into the pathogenesis of cardiac conduction, heart block and ventricular fibrillation.

6,543 Indian Asian ancestry individuals

Chapter III

Study Statistics

Key metrics and study information

18156
Total Participants
GWAS
Study Type
Yes
Replicated
6,243 Indian Asian ancestry individuals, 5,370 European ancestry individuals
Replication Participants
South Asian, European
Ancestry
U.K.
Recruitment Country
Chapter IV

Analysis

Comprehensive review of health and genetic findings

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