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GWAS Study

Genome-wide association of serum uric acid concentration: replication of sequence variants in an island population of the Adriatic coast of Croatia.

Karns R, Zhang G, Sun G et al.

22229870 PubMed ID
GWAS Study Type
1300 Participants
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Chapter I

Publication Details

Comprehensive information about this research publication

Authors

KR
Karns R
ZG
Zhang G
SG
Sun G
RI
Rao Indugula S
CH
Cheng H
HD
Havas-Augustin D
NN
Novokmet N
RD
Rudan D
DZ
Durakovic Z
MS
Missoni S
CR
Chakraborty R
RP
Rudan P
DR
Deka R
Chapter II

Abstract

Summary of the research findings

A genome-wide association study of serum uric acid (SUA) laevels was performed in a relatively isolated population of European descent from an island of the Adriatic coast of Croatia. The study sample included 532 unrelated and 768 related individuals from 235 pedigrees. Inflation due to relatedness was controlled by using genomic control. Genetic association was assessed with 2,241,249 single nucleotide polymorphisms (SNPs) in 1300 samples after adjusting for age and gender. Our study replicated four previously reported SUA loci (SLC2A9, ABCG2, RREB1, and SLC22A12). The strongest association was found with a SNP in SLC2A9 (rs13129697, P=2.33×10(-19)), which exhibited significant gender-specific effects, 35.76 μmol/L (P=2.11×10(-19)) in females and 19.58 μmol/L (P=5.40×10(-5)) in males. Within this region of high linkage disequilibrium, we also detected a strong association with a nonsynonymous SNP, rs16890979 (P=2.24×10(-17)), a putative causal variant for SUA variation. In addition, we identified several novel loci suggestive of association with uric acid levels (SEMA5A, TMEM18, SLC28A2, and ODZ2), although the P-values (P<5×10(-6)) did not reach the threshold of genome-wide significance. Together, these findings provide further confirmation of previously reported uric-acid-related genetic variants and highlight suggestive new loci for additional investigation.

1,300 European ancestry individuals

Chapter III

Study Statistics

Key metrics and study information

1300
Total Participants
GWAS
Study Type
No
Replicated
European
Ancestry
Croatia
Recruitment Country
Chapter IV

Analysis

Comprehensive review of health and genetic findings

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