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GWAS Study

Genome-wide association study in a Chinese population with diabetic retinopathy.

Sheu WH, Kuo JZ, Lee IT et al.

23562823 PubMed ID
GWAS Study Type
1592 Participants
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Chapter I

Publication Details

Comprehensive information about this research publication

Authors

SW
Sheu WH
KJ
Kuo JZ
LI
Lee IT
HY
Hung YJ
LW
Lee WJ
TH
Tsai HY
WJ
Wang JS
GM
Goodarzi MO
KR
Klein R
KB
Klein BE
IE
Ipp E
LS
Lin SY
GX
Guo X
HC
Hsieh CH
TK
Taylor KD
FC
Fu CP
RJ
Rotter JI
CY
Chen YD
Chapter II

Abstract

Summary of the research findings

Diabetic retinopathy (DR) is a leading cause of preventable blindness in adults. To identify genetic contributions in DR, we studied 2071 type 2 diabetics. We first conducted a genome-wide association study of 1007 individuals, comparing 570 subjects with ≥8 years duration without DR (controls) with 437 PDR (cases) in the Chinese discovery cohort. Cases and controls were similar for HbA1c, diabetes duration and body mass index. Association analysis with imputed data identified three novel loci: TBC1D4-COMMD6-UCHL3 (rs9565164, P = 1.3 × 10(-7)), LRP2-BBS5 (rs1399634, P = 2.0 × 10(-6)) and ARL4C-SH3BP4 (rs2380261, P = 2.1 × 10(-6)). Analysis of an independent cohort of 585 Hispanics diabetics with or without DR though did not confirm these signals. These genes are still of particular interest because they are involved in insulin regulation, inflammation, lipid signaling and apoptosis pathways, all of which are possibly involved with DR. Our finding nominates possible novel loci as potential DR susceptibility genes in the Chinese that are independent of the level of HbA1c and duration of diabetes and may provide insight into the pathophysiology of DR.

437 Chinese ancestry cases, 570 Chinese ancestry controls

Chapter III

Study Statistics

Key metrics and study information

1592
Total Participants
GWAS
Study Type
Yes
Replicated
329 Hispanic cases, 256 Hispanic controls
Replication Participants
East Asian, Hispanic or Latin American
Ancestry
China, U.S.
Recruitment Country
Chapter IV

Analysis

Comprehensive review of health and genetic findings

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