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GWAS Study

Common genetic variants on 1p13.2 associate with risk of autism.

Xia K, Guo H, Hu Z et al.

24189344 PubMed ID
GWAS Study Type
5842 Participants
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Chapter I

Publication Details

Comprehensive information about this research publication

Authors

XK
Xia K
GH
Guo H
HZ
Hu Z
XG
Xun G
ZL
Zuo L
PY
Peng Y
WK
Wang K
HY
He Y
XZ
Xiong Z
SL
Sun L
PQ
Pan Q
LZ
Long Z
ZX
Zou X
LX
Li X
LW
Li W
XX
Xu X
LL
Lu L
LY
Liu Y
HY
Hu Y
TD
Tian D
LL
Long L
OJ
Ou J
LY
Liu Y
LX
Li X
ZL
Zhang L
PY
Pan Y
CJ
Chen J
PH
Peng H
LQ
Liu Q
LX
Luo X
SW
Su W
WL
Wu L
LD
Liang D
DH
Dai H
YX
Yan X
FY
Feng Y
TB
Tang B
LJ
Li J
MZ
Miedzybrodzka Z
XJ
Xia J
ZZ
Zhang Z
LX
Luo X
ZX
Zhang X
SC
St Clair D
ZJ
Zhao J
ZF
Zhang F
Chapter II

Abstract

Summary of the research findings

Autism is a highly heritable neurodevelopmental disorder, and known genetic variants, mostly rare, account only for a small proportion of cases. Here we report a genome-wide association study on autism using two Chinese cohorts as gene discovery (n=2150) and three data sets of European ancestry populations for replication analysis of top association signals. Meta-analysis identified three single-nucleotide polymorphisms, rs936938 (P=4.49 × 10(-8)), non-synonymous rs6537835 (P=3.26 × 10(-8)) and rs1877455 (P=8.70 × 10(-8)), and related haplotypes, AMPD1-NRAS-CSDE1, TRIM33 and TRIM33-BCAS2, associated with autism; all were mapped to a previously reported linkage region (1p13.2) with autism. These genetic associations were further supported by a cis-acting regulatory effect on the gene expressions of CSDE1, NRAS and TRIM33 and by differential expression of CSDE1 and TRIM33 in the human prefrontal cortex of post-mortem brains between subjects with and those without autism. Our study suggests TRIM33 and NRAS-CSDE1 as candidate genes for autism, and may provide a novel insight into the etiology of autism.

275 Chinese ancestry cases and 550 Chinese ancestry controls from 275 trios, 136 Chinese ancestry cases, 984 Chinese ancestry controls

Chapter III

Study Statistics

Key metrics and study information

5842
Total Participants
GWAS
Study Type
Yes
Replicated
1,299 European ancestry cases and 2,598 European ancestry controls from 1,299 trios
Replication Participants
East Asian, European
Ancestry
China
Recruitment Country
Chapter IV

Analysis

Comprehensive review of health and genetic findings

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