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GWAS Study

Severe osteoarthritis of the hand associates with common variants within the ALDH1A2 gene and with rare variants at 1p31.

Styrkarsdottir U, Thorleifsson G, Helgadottir HT et al.

24728293 PubMed ID
GWAS Study Type
78162 Participants
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Chapter I

Publication Details

Comprehensive information about this research publication

Authors

SU
Styrkarsdottir U
TG
Thorleifsson G
HH
Helgadottir HT
BN
Bomer N
MS
Metrustry S
BS
Bierma-Zeinstra S
SA
Strijbosch AM
EE
Evangelou E
HD
Hart D
BM
Beekman M
JA
Jonasdottir A
SA
Sigurdsson A
EF
Eiriksson FF
TM
Thorsteinsdottir M
FM
Frigge ML
KA
Kong A
GS
Gudjonsson SA
MO
Magnusson OT
MG
Masson G
HA
Hofman A
AN
Arden NK
IT
Ingvarsson T
LS
Lohmander S
KM
Kloppenburg M
RF
Rivadeneira F
NR
Nelissen RG
ST
Spector T
UA
Uitterlinden A
SP
Slagboom PE
TU
Thorsteinsdottir U
JI
Jonsdottir I
VA
Valdes AM
MI
Meulenbelt I
VM
van Meurs J
JH
Jonsson H
SK
Stefansson K
Chapter II

Abstract

Summary of the research findings

Osteoarthritis is the most common form of arthritis and is a major cause of pain and disability in the elderly. To search for sequence variants that confer risk of osteoarthritis of the hand, we carried out a genome-wide association study (GWAS) in subjects with severe hand osteoarthritis, using variants identified through the whole-genome sequencing of 2,230 Icelanders. We found two significantly associated loci in the Icelandic discovery set: at 15q22 (frequency of 50.7%, odds ratio (OR) = 1.51, P = 3.99 × 10(-10)) in the ALDH1A2 gene and at 1p31 (frequency of 0.02%, OR = 50.6, P = 9.8 × 10(-10)). Among the carriers of the variant at 1p31 is a family with several members in whom the risk allele segregates with osteoarthritis. The variants within the ALDH1A2 gene were confirmed in replication sets from The Netherlands and the UK, yielding an overall association of OR = 1.46 and P = 1.1 × 10(-11) (rs3204689).

623 European ancestry cases, 69,153 European ancestry controls

Chapter III

Study Statistics

Key metrics and study information

78162
Total Participants
GWAS
Study Type
Yes
Replicated
214 European ancestry cases, 8,172 European ancestry controls
Replication Participants
European
Ancestry
Sweden, Netherlands, U.K., Iceland
Recruitment Country
Chapter IV

Analysis

Comprehensive review of health and genetic findings

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Analysis In Progress

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