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GWAS Study

Trans-ethnic genome-wide association study of colorectal cancer identifies a new susceptibility locus in VTI1A.

Wang H, Burnett T, Kono S et al.

25105248 PubMed ID
GWAS Study Type
48054 Participants
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Chapter I

Publication Details

Comprehensive information about this research publication

Authors

WH
Wang H
BT
Burnett T
KS
Kono S
HC
Haiman CA
IM
Iwasaki M
WL
Wilkens LR
LL
Loo LW
VD
Van Den Berg D
KL
Kolonel LN
HB
Henderson BE
KT
Keku TO
SR
Sandler RS
SL
Signorello LB
BW
Blot WJ
NP
Newcomb PA
PM
Pande M
AC
Amos CI
WD
West DW
BS
Bézieau S
BS
Berndt SI
ZB
Zanke BW
HL
Hsu L
LN
Lindor NM
HR
Haile RW
HJ
Hopper JL
JM
Jenkins MA
GS
Gallinger S
CG
Casey G
SS
Stenzel SL
SF
Schumacher FR
PU
Peters U
GS
Gruber SB
TS
Tsugane S
SD
Stram DO
LM
Le Marchand L
Chapter II

Abstract

Summary of the research findings

The genetic basis of sporadic colorectal cancer (CRC) is not well explained by known risk polymorphisms. Here we perform a meta-analysis of two genome-wide association studies in 2,627 cases and 3,797 controls of Japanese ancestry and 1,894 cases and 4,703 controls of African ancestry, to identify genetic variants that contribute to CRC susceptibility. We replicate genome-wide statistically significant associations (P<5 × 10(-8)) in 16,823 cases and 18,211 controls of European ancestry. This study reveals a new pan-ethnic CRC risk locus at 10q25 (rs12241008, intronic to VTI1A; P=1.4 × 10(-9)), providing additional insight into the aetiology of CRC and highlighting the value of association mapping in diverse populations.

2,627 Japanese ancestry cases, 3,797 Japanese ancestry controls, 1,893 African American cases, 4,703 African American controls

Chapter III

Study Statistics

Key metrics and study information

48054
Total Participants
GWAS
Study Type
Yes
Replicated
16,823 European ancestry cases, 18,211 European ancestry controls
Replication Participants
East Asian, African American or Afro-Caribbean, European
Ancestry
U.S., Japan, Israel, Australia, Canada, Germany, France
Recruitment Country
Chapter IV

Analysis

Comprehensive review of health and genetic findings

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