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GWAS Study

A Genome-Wide Scan Identifies Variants in NFIB Associated with Metastasis in Patients with Osteosarcoma.

Mirabello L, Koster R, Moriarity BS et al.

26084801 PubMed ID
GWAS Study Type
935 Participants
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Chapter I

Publication Details

Comprehensive information about this research publication

Authors

ML
Mirabello L
KR
Koster R
MB
Moriarity BS
SL
Spector LG
MP
Meltzer PS
GJ
Gary J
MM
Machiela MJ
PN
Pankratz N
PO
Panagiotou OA
LD
Largaespada D
WZ
Wang Z
GJ
Gastier-Foster JM
GR
Gorlick R
KC
Khanna C
DT
de Toledo SR
PA
Petrilli AS
PA
Patiño-Garcia A
SL
Sierrasesúmaga L
LF
Lecanda F
AI
Andrulis IL
WJ
Wunder JS
GN
Gokgoz N
SM
Serra M
HC
Hattinger C
PP
Picci P
SK
Scotlandi K
FA
Flanagan AM
TR
Tirabosco R
AM
Amary MF
HD
Halai D
BM
Ballinger ML
TD
Thomas DM
DS
Davis S
BD
Barkauskas DA
MN
Marina N
HL
Helman L
OG
Otto GM
BK
Becklin KL
WN
Wolf NK
WM
Weg MT
TM
Tucker M
WS
Wacholder S
FJ
Fraumeni JF
CN
Caporaso NE
BJ
Boland JF
HB
Hicks BD
VA
Vogt A
BL
Burdett L
YM
Yeager M
HR
Hoover RN
CS
Chanock SJ
SS
Savage SA
Chapter II

Abstract

Summary of the research findings

Metastasis is the leading cause of death in patients with osteosarcoma, the most common pediatric bone malignancy. We conducted a multistage genome-wide association study of osteosarcoma metastasis at diagnosis in 935 osteosarcoma patients to determine whether germline genetic variation contributes to risk of metastasis. We identified an SNP, rs7034162, in NFIB significantly associated with metastasis in European osteosarcoma cases, as well as in cases of African and Brazilian ancestry (meta-analysis of all cases: P = 1.2 × 10(-9); OR, 2.43; 95% confidence interval, 1.83-3.24). The risk allele was significantly associated with lowered NFIB expression, which led to increased osteosarcoma cell migration, proliferation, and colony formation. In addition, a transposon screen in mice identified a significant proportion of osteosarcomas harboring inactivating insertions in Nfib and with lowered NFIB expression. These data suggest that germline genetic variation at rs7034162 is important in osteosarcoma metastasis and that NFIB is an osteosarcoma metastasis susceptibility gene.

122 European ancestry cases with metastasis, 419 European ancestry cases without metastasis

Chapter III

Study Statistics

Key metrics and study information

935
Total Participants
GWAS
Study Type
Yes
Replicated
43 European ancestry cases with metastasis, 22 African ancestry cases with metastasis, 40 Brazilian ancestry cases with metastasis, 183 European ancestry cases without metastasis, 39 African ancestry cases without metastasis, 67 Brazilian ancestry cases without metastasis
Replication Participants
European, African unspecified, Hispanic or Latin American
Ancestry
U.S., Australia, Canada, U.K., Spain, Italy, Brazil
Recruitment Country
Chapter IV

Analysis

Comprehensive review of health and genetic findings

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