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GWAS Study

A coding variant in RARG confers susceptibility to anthracycline-induced cardiotoxicity in childhood cancer.

Aminkeng F, Bhavsar AP, Visscher H et al.

26237429 PubMed ID
GWAS Study Type
456 Participants
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Chapter I

Publication Details

Comprehensive information about this research publication

Authors

AF
Aminkeng F
BA
Bhavsar AP
VH
Visscher H
RS
Rassekh SR
LY
Li Y
LJ
Lee JW
BL
Brunham LR
CH
Caron HN
VD
van Dalen EC
KL
Kremer LC
VD
van der Pal HJ
AU
Amstutz U
RM
Rieder MJ
BD
Bernstein D
CB
Carleton BC
HM
Hayden MR
RC
Ross CJ
Chapter II

Abstract

Summary of the research findings

Anthracyclines are used in over 50% of childhood cancer treatment protocols, but their clinical usefulness is limited by anthracycline-induced cardiotoxicity (ACT) manifesting as asymptomatic cardiac dysfunction and congestive heart failure in up to 57% and 16% of patients, respectively. Candidate gene studies have reported genetic associations with ACT, but these studies have in general lacked robust patient numbers, independent replication or functional validation. Thus, the individual variability in ACT susceptibility remains largely unexplained. We performed a genome-wide association study in 280 patients of European ancestry treated for childhood cancer, with independent replication in similarly treated cohorts of 96 European and 80 non-European patients. We identified a nonsynonymous variant (rs2229774, p.Ser427Leu) in RARG highly associated with ACT (P = 5.9 × 10(-8), odds ratio (95% confidence interval) = 4.7 (2.7-8.3)). This variant alters RARG function, leading to derepression of the key ACT genetic determinant Top2b, and provides new insight into the pathophysiology of this severe adverse drug reaction.

32 European ancestry cases with cardiotoxicity, 248 European ancestry cases without cardiotoxicity

Chapter III

Study Statistics

Key metrics and study information

456
Total Participants
GWAS
Study Type
Yes
Replicated
22 European ancestry cases with cardiotoxicity, 74 European ancestry cases without cardiotoxicity, 2 African cases with cardiotoxicity, 9 African cases without cardiotoxicity, 5 Hispanic cases with cardiotoxicity, 18 Hispanic cases without cardiotoxicity, 8 East Asian cases with cardiotoxicity, 23 East Asian cases without cardiotoxicity, 4 Aboriginal Canadian cases with cardiotoxicity, 11 Aboriginal Canadian cases without cardiotoxicity
Replication Participants
East Asian, Hispanic or Latin American, African American or Afro-Caribbean, European, Other
Ancestry
Canada, U.S., Netherlands
Recruitment Country
Chapter IV

Analysis

Comprehensive review of health and genetic findings

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