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GWAS Study

Genome-wide association study reveals two loci for serum magnesium concentrations in European-American children.

Chang X, Glessner J, Tin A et al.

26685716 PubMed ID
GWAS Study Type
17890 Participants
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Chapter I

Publication Details

Comprehensive information about this research publication

Authors

CX
Chang X
GJ
Glessner J
TA
Tin A
LJ
Li J
GY
Guo Y
WZ
Wei Z
LY
Liu Y
MF
Mentch FD
HC
Hou C
ZY
Zhao Y
WT
Wang T
QH
Qiu H
KC
Kim C
SP
Sleiman PM
HH
Hakonarson H
Chapter II

Abstract

Summary of the research findings

Magnesium ions are essential to the basic metabolic processes in the human body. Previous genetic studies indicate that serum magnesium levels are highly heritable, and a few genetic loci have been reported involving regulation of serum magnesium in adults. In this study, we examined if additional loci influence serum magnesium levels in children. We performed a genome-wide association study (GWAS) on 2,267 European-American children genotyped on the Illumina HumanHap550 or Quad610 arrays, sharing over 500,000 markers, as the discovery cohort and 257 European-American children genotyped on the Illumina Human OmniExpress arrays as the replication cohort. After genotype imputation, the strongest associations uncovered were with imputed SNPs residing within the FGFR2 (rs1219515, P = 1.1 × 10(-5)) and PAPSS2 (rs1969821, P = 7.2 × 10(-6)) loci in the discovery cohort, both of which were robustly replicated in our independent patient cohort (rs1219515, P = 3.5 × 10(-3); rs1969821, P = 1.2 × 10(-2)). The associations at the FGFR2 locus were also weakly replicated in a dataset from a previous GWAS of serum magnesium in European adults. Our results indicate that FGFR2 and PAPSS2 may play an important role in the regulation of magnesium homeostasis in children of European-American ancestry.

2,267 European American children

Chapter III

Study Statistics

Key metrics and study information

17890
Total Participants
GWAS
Study Type
Yes
Replicated
257 European American children, 15,366 European ancestry adults
Replication Participants
European
Ancestry
U.S.
Recruitment Country
Chapter IV

Analysis

Comprehensive review of health and genetic findings

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