Menu
GWAS Study

GWAS Identifies New Loci for Painful Temporomandibular Disorder: Hispanic Community Health Study/Study of Latinos.

Sanders AE, Jain D, Sofer T et al.

28081371 PubMed ID
GWAS Study Type
28246 Participants
Scroll to explore
Chapter I

Publication Details

Comprehensive information about this research publication

Authors

SA
Sanders AE
JD
Jain D
ST
Sofer T
KK
Kerr KF
LC
Laurie CC
SJ
Shaffer JR
MM
Marazita ML
KL
Kaste LM
SG
Slade GD
FR
Fillingim RB
OR
Ohrbach R
MW
Maixner W
KT
Kocher T
BO
Bernhardt O
TA
Teumer A
SC
Schwahn C
SK
Sipilä K
LR
Lähdesmäki R
MM
Männikkö M
PP
Pesonen P
JM
Järvelin M
RC
Rizzatti-Barbosa CM
MC
Meloto CB
RM
Ribeiro-Dasilva M
DL
Diatchenko L
SP
Serrano P
SS
Smith SB
Chapter II

Abstract

Summary of the research findings

Temporomandibular disorder (TMD) is a musculoskeletal condition characterized by pain and reduced function in the temporomandibular joint and/or associated masticatory musculature. Prevalence in the United States is 5% and twice as high among women as men. We conducted a discovery genome-wide association study (GWAS) of TMD in 10,153 participants (769 cases, 9,384 controls) of the US Hispanic Community Health Study/Study of Latinos (HCHS/SOL). The most promising single-nucleotide polymorphisms (SNPs) were tested in meta-analysis of 4 independent cohorts. One replication cohort was from the United States, and the others were from Germany, Finland, and Brazil, totaling 1,911 TMD cases and 6,903 controls. A locus near the sarcoglycan alpha ( SGCA), rs4794106, was suggestive in the discovery analysis ( P = 2.6 × 106) and replicated (i.e., 1-tailed P = 0.016) in the Brazilian cohort. In the discovery cohort, sex-stratified analysis identified 2 additional genome-wide significant loci in females. One lying upstream of the relaxin/insulin-like family peptide receptor 2 ( RXP2) (chromosome 13, rs60249166, odds ratio [OR] = 0.65, P = 3.6 × 10-8) was replicated among females in the meta-analysis (1-tailed P = 0.052). The other (chromosome 17, rs1531554, OR = 0.68, P = 2.9 × 10-8) was replicated among females (1-tailed P = 0.002), as well as replicated in meta-analysis of both sexes (1-tailed P = 0.021). A novel locus at genome-wide level of significance (rs73460075, OR = 0.56, P = 3.8 × 10-8) in the intron of the dystrophin gene DMD (X chromosome), and a suggestive locus on chromosome 7 (rs73271865, P = 2.9 × 10-7) upstream of the Sp4 Transcription Factor ( SP4) gene were identified in the discovery cohort, but neither of these was replicated. The SGCA gene encodes SGCA, which is involved in the cellular structure of muscle fibers and, along with DMD, forms part of the dystrophin-glycoprotein complex. Functional annotation suggested that several of these variants reside in loci that regulate processes relevant to TMD pathobiologic processes.

769 Hispanic cases, 9,384 Hispanic controls

Chapter III

Study Statistics

Key metrics and study information

28246
Total Participants
GWAS
Study Type
Yes
Replicated
768 European ancestry cases, 4,845 European ancestry controls, 144 Hispanic/Latin American cases, 492 Hispanic/Latin American controls, 999 cases, 2,031 controls
Replication Participants
Hispanic or Latin American, European
Ancestry
Brazil, Germany, Finland, U.S.
Recruitment Country
Chapter IV

Analysis

Comprehensive review of health and genetic findings

Important Disclaimer: This review has been performed semi-automatically and is provided for informational purposes only. While we strive for accuracy, this analysis may contain errors, omissions, or misinterpretations of the original research. DNA Genics disclaims all liability for any inaccuracies, errors, or consequences arising from the use of this information. Users should independently verify all information and consult original research publications before making any decisions based on this content. This analysis is not intended as a substitute for professional scientific review or medical advice.

Analysis In Progress

Our analysis of this publication is currently being prepared. Please check back soon for comprehensive insights into the health and genetic findings discussed in this research.