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GWAS Study

Sequence variants in ARHGAP15, COLQ and FAM155A associate with diverticular disease and diverticulitis.

Sigurdsson S, Alexandersson KF, Sulem P et al.

28585551 PubMed ID
GWAS Study Type
260367 Participants
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Chapter I

Publication Details

Comprehensive information about this research publication

Authors

SS
Sigurdsson S
AK
Alexandersson KF
SP
Sulem P
FB
Feenstra B
GS
Gudmundsdottir S
HG
Halldorsson GH
OS
Olafsson S
SA
Sigurdsson A
RT
Rafnar T
TT
Thorgeirsson T
SE
Sørensen E
NA
Nordholm-Carstensen A
BJ
Burcharth J
AJ
Andersen J
JH
Jørgensen HS
PE
Possfelt-Møller E
UH
Ullum H
TG
Thorleifsson G
MG
Masson G
TU
Thorsteinsdottir U
MM
Melbye M
GD
Gudbjartsson DF
ST
Stefansson T
JI
Jonsdottir I
SK
Stefansson K
Chapter II

Abstract

Summary of the research findings

Diverticular disease is characterized by pouches (that is, diverticulae) due to weakness in the bowel wall, which can become infected and inflamed causing diverticulitis, with potentially severe complications. Here, we test 32.4 million sequence variants identified through whole-genome sequencing (WGS) of 15,220 Icelanders for association with diverticular disease (5,426 cases) and its more severe form diverticulitis (2,764 cases). Subsequently, 16 sequence variants are followed up in a diverticular disease sample from Denmark (5,970 cases, 3,020 controls). In the combined Icelandic and Danish data sets we observe significant association of intronic variants in ARHGAP15 (Rho GTPase-activating protein 15; rs4662344-T: P=1.9 × 10-18, odds ratio (OR)=1.23) and COLQ (collagen-like tail subunit of asymmetric acetylcholinesterase; rs7609897-T: P=1.5 × 10-10, OR=0.87) with diverticular disease and in FAM155A (family with sequence similarity 155A; rs67153654-A: P=3.0 × 10-11, OR=0.82) with diverticulitis. These are the first loci shown to associate with diverticular disease in a genome-wide study.

5,426 Icelandic ancestry cases, 245,951 Icelandic ancestry controls (includes non-array genotyped, whole-genome imputed individuals)

Chapter III

Study Statistics

Key metrics and study information

260367
Total Participants
GWAS
Study Type
Yes
Replicated
5,970 Danish ancestry cases, 3,020 Danish ancestry controls
Replication Participants
European
Ancestry
Denmark, Iceland
Recruitment Country
Chapter IV

Analysis

Comprehensive review of health and genetic findings

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