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GWAS Study

Large-scale association analysis identifies new lung cancer susceptibility loci and heterogeneity in genetic susceptibility across histological subtypes.

McKay JD, Hung RJ, Han Y et al.

28604730 PubMed ID
GWAS Study Type
85716 Participants
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Chapter I

Publication Details

Comprehensive information about this research publication

Authors

MJ
McKay JD
HR
Hung RJ
HY
Han Y
ZX
Zong X
CR
Carreras-Torres R
CD
Christiani DC
CN
Caporaso NE
JM
Johansson M
XX
Xiao X
LY
Li Y
BJ
Byun J
DA
Dunning A
PK
Pooley KA
QD
Qian DC
JX
Ji X
LG
Liu G
TM
Timofeeva MN
BS
Bojesen SE
WX
Wu X
LM
Le Marchand L
AD
Albanes D
BH
Bickeböller H
AM
Aldrich MC
BW
Bush WS
TA
Tardon A
RG
Rennert G
TM
Teare MD
FJ
Field JK
KL
Kiemeney LA
LP
Lazarus P
HA
Haugen A
LS
Lam S
SM
Schabath MB
AA
Andrew AS
SH
Shen H
HY
Hong YC
YJ
Yuan JM
BP
Bertazzi PA
PA
Pesatori AC
YY
Ye Y
DN
Diao N
SL
Su L
ZR
Zhang R
BY
Brhane Y
LN
Leighl N
JJ
Johansen JS
MA
Mellemgaard A
SW
Saliba W
HC
Haiman CA
WL
Wilkens LR
FA
Fernandez-Somoano A
FG
Fernandez-Tardon G
VD
van der Heijden HFM
KJ
Kim JH
DJ
Dai J
HZ
Hu Z
DM
Davies MPA
MM
Marcus MW
BH
Brunnström H
MJ
Manjer J
MO
Melander O
MD
Muller DC
OK
Overvad K
TA
Trichopoulou A
TR
Tumino R
DJ
Doherty JA
BM
Barnett MP
CC
Chen C
GG
Goodman GE
CA
Cox A
TF
Taylor F
WP
Woll P
BI
Brüske I
WH
Wichmann HE
MJ
Manz J
MT
Muley TR
RA
Risch A
RA
Rosenberger A
GK
Grankvist K
JM
Johansson M
SF
Shepherd FA
TM
Tsao MS
AS
Arnold SM
HE
Haura EB
BC
Bolca C
HI
Holcatova I
JV
Janout V
KM
Kontic M
LJ
Lissowska J
MA
Mukeria A
OS
Ognjanovic S
OT
Orlowski TM
SG
Scelo G
SB
Swiatkowska B
ZD
Zaridze D
BP
Bakke P
SV
Skaug V
ZS
Zienolddiny S
DE
Duell EJ
BL
Butler LM
KW
Koh WP
GY
Gao YT
HR
Houlston RS
MJ
McLaughlin J
SV
Stevens VL
JP
Joubert P
LM
Lamontagne M
ND
Nickle DC
OM
Obeidat M
TW
Timens W
ZB
Zhu B
SL
Song L
KL
Kachuri L
AM
Artigas MS
TM
Tobin MD
WL
Wain LV
RT
Rafnar T
TT
Thorgeirsson TE
RG
Reginsson GW
SK
Stefansson K
HD
Hancock DB
BL
Bierut LJ
SM
Spitz MR
GN
Gaddis NC
LS
Lutz SM
GF
Gu F
JE
Johnson EO
KA
Kamal A
PC
Pikielny C
ZD
Zhu D
LS
Lindströem S
JX
Jiang X
TR
Tyndale RF
CG
Chenevix-Trench G
BJ
Beesley J
BY
Bossé Y
CS
Chanock S
BP
Brennan P
LM
Landi MT
AC
Amos CI
Chapter II

Abstract

Summary of the research findings

Although several lung cancer susceptibility loci have been identified, much of the heritability for lung cancer remains unexplained. Here 14,803 cases and 12,262 controls of European descent were genotyped on the OncoArray and combined with existing data for an aggregated genome-wide association study (GWAS) analysis of lung cancer in 29,266 cases and 56,450 controls. We identified 18 susceptibility loci achieving genome-wide significance, including 10 new loci. The new loci highlight the striking heterogeneity in genetic susceptibility across the histological subtypes of lung cancer, with four loci associated with lung cancer overall and six loci associated with lung adenocarcinoma. Gene expression quantitative trait locus (eQTL) analysis in 1,425 normal lung tissue samples highlights RNASET2, SECISBP2L and NRG1 as candidate genes. Other loci include genes such as a cholinergic nicotinic receptor, CHRNA2, and the telomere-related genes OFBC1 and RTEL1. Further exploration of the target genes will continue to provide new insights into the etiology of lung cancer.

29,266 European ancestry cases, 56,450 European ancestry controls

Chapter III

Study Statistics

Key metrics and study information

85716
Total Participants
GWAS
Study Type
No
Replicated
European
Ancestry
Canada, U.S., France, Germany, Netherlands, Israel, Denmark, Finland, Iceland, Norway, Sweden, U.K., Greece, Italy, Spain
Recruitment Country
Chapter IV

Analysis

Comprehensive review of health and genetic findings

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Analysis In Progress

Our analysis of this publication is currently being prepared. Please check back soon for comprehensive insights into the health and genetic findings discussed in this research.