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GWAS Study

Genome-wide association study of neovascular age-related macular degeneration in the Thai population.

Ruamviboonsuk P, Tadarati M, Singhanetr P et al.

28703135 PubMed ID
GWAS Study Type
2296 Participants
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Chapter I

Publication Details

Comprehensive information about this research publication

Authors

RP
Ruamviboonsuk P
TM
Tadarati M
SP
Singhanetr P
WS
Wattanapokayakit S
KP
Kunhapan P
WT
Wanitchanon T
WN
Wichukchinda N
MT
Mushiroda T
AM
Akiyama M
MY
Momozawa Y
KM
Kubo M
MS
Mahasirimongkol S
Chapter II

Abstract

Summary of the research findings

We performed a genome-wide association study on 377 cases of neovascular age-related macular degeneration (AMD) and 1074 controls to determine the association of previously reported genetic variants associated with neovascular AMD in the Thai population. All patients were of Thai ancestry. We confirmed the association of age-related maculopathy susceptibility 2 (ARMS2) rs10490924 (P=7.38 × 10-17), HTRA1 rs11200638 (P=5.47 × 10-17) and complement factor H gene (CFH) rs800292 (P=2.53 × 10-8) with neovascular AMD, all loci passing the genome-wide significance level (P<5.22 × 10-8). We also found association of the previously reported CFH rs10737680 (P=1.76 × 10-6) locus in the discovery sample. Two loci not previously reported to be associated with neovascular AMD were selected for replication in 222 cases and 623 controls. The loci included LINCO1317 rs6733379 and rs2384550 on chromosome 12. LINCO1317 rs6733379 (P=3.85 × 10-2) remained significantly associated with neovascular AMD after replication. In conclusion, we confirm that ARMS2, HTRA1 and CFH variants are associated with neovascular AMD in the Thai population. Findings from this study also suggest that variants contributing to the susceptibility of neovascular AMD in the Thai population are mostly similar to other Asians with additional local genetic risks that may specifically be identified in Thai population.

377 Thai ancestry cases, 1,074 Thai ancestry controls

Chapter III

Study Statistics

Key metrics and study information

2296
Total Participants
GWAS
Study Type
Yes
Replicated
222 Thai ancestry cases, 623 Thai ancestry controls
Replication Participants
South East Asian
Ancestry
Thailand
Recruitment Country
Chapter IV

Analysis

Comprehensive review of health and genetic findings

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