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GWAS Study

Genetic variants of calcium and vitamin D metabolism in kidney stone disease.

Howles SA, Wiberg A, Goldsworthy M et al.

31729369 PubMed ID
GWAS Study Type
395044 Participants
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Chapter I

Publication Details

Comprehensive information about this research publication

Authors

HS
Howles SA
WA
Wiberg A
GM
Goldsworthy M
BA
Bayliss AL
GA
Gluck AK
NM
Ng M
GE
Grout E
TC
Tanikawa C
KY
Kamatani Y
TC
Terao C
TA
Takahashi A
KM
Kubo M
MK
Matsuda K
TR
Thakker RV
TB
Turney BW
FD
Furniss D
Chapter II

Abstract

Summary of the research findings

Kidney stone disease (nephrolithiasis) is a major clinical and economic health burden with a heritability of ~45-60%. We present genome-wide association studies in British and Japanese populations and a trans-ethnic meta-analysis that include 12,123 cases and 417,378 controls, and identify 20 nephrolithiasis-associated loci, seven of which are previously unreported. A CYP24A1 locus is predicted to affect vitamin D metabolism and five loci, DGKD, DGKH, WDR72, GPIC1, and BCR, are predicted to influence calcium-sensing receptor (CaSR) signaling. In a validation cohort of only nephrolithiasis patients, the CYP24A1-associated locus correlates with serum calcium concentration and a number of nephrolithiasis episodes while the DGKD-associated locus correlates with urinary calcium excretion. In vitro, DGKD knockdown impairs CaSR-signal transduction, an effect rectified with the calcimimetic cinacalcet. Our findings indicate that studies of genotype-guided precision-medicine approaches, including withholding vitamin D supplementation and targeting vitamin D activation or CaSR-signaling pathways in patients with recurrent kidney stones, are warranted.

6,536 British ancestry cases, 388,508 British ancestry controls

Chapter III

Study Statistics

Key metrics and study information

395044
Total Participants
GWAS
Study Type
No
Replicated
European, East Asian
Ancestry
U.K., Japan
Recruitment Country
Chapter IV

Analysis

Comprehensive review of health and genetic findings

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Analysis In Progress

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