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GWAS Study

Insights into the genetic basis of retinal detachment.

Boutin TS, Charteris DG, Chandra A et al.

31816047 PubMed ID
GWAS Study Type
363126 Participants
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Chapter I

Publication Details

Comprehensive information about this research publication

Authors

BT
Boutin TS
CD
Charteris DG
CA
Chandra A
CS
Campbell S
HC
Hayward C
CA
Campbell A
NP
Nandakumar P
HD
Hinds D
MD
Mitry D
VV
Vitart V
Chapter II

Abstract

Summary of the research findings

Retinal detachment (RD) is a serious and common condition, but genetic studies to date have been hampered by the small size of the assembled cohorts. In the UK Biobank data set, where RD was ascertained by self-report or hospital records, genetic correlations between RD and high myopia or cataract operation were, respectively, 0.46 (SE = 0.08) and 0.44 (SE = 0.07). These correlations are consistent with known epidemiological associations. Through meta-analysis of genome-wide association studies using UK Biobank RD cases (N = 3 977) and two cohorts, each comprising ~1 000 clinically ascertained rhegmatogenous RD patients, we uncovered 11 genome-wide significant association signals. These are near or within ZC3H11B, BMP3, COL22A1, DLG5, PLCE1, EFEMP2, TYR, FAT3, TRIM29, COL2A1 and LOXL1. Replication in the 23andMe data set, where RD is self-reported by participants, firmly establishes six RD risk loci: FAT3, COL22A1, TYR, BMP3, ZC3H11B and PLCE1. Based on the genetic associations with eye traits described to date, the first two specifically impact risk of a RD, whereas the last four point to shared aetiologies with macular condition, myopia and glaucoma. Fine-mapping prioritized the lead common missense variant (TYR S192Y) as causal variant at the TYR locus and a small set of credible causal variants at the FAT3 locus. The larger study size presented here, enabled by resources linked to health records or self-report, provides novel insights into RD aetiology and underlying pathological pathways.

2,893 British ancestry cases, 360,233 British ancestry controls

Chapter III

Study Statistics

Key metrics and study information

363126
Total Participants
GWAS
Study Type
Yes
Replicated
9,171 European ancestry cases, 406,168 European ancestry controls
Replication Participants
European
Ancestry
Chapter IV

Analysis

Comprehensive review of health and genetic findings

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Analysis In Progress

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