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GWAS Study

Genome-wide association study of metabolic syndrome in Korean populations.

Oh SW, Lee JE, Shin E et al.

31910446 PubMed ID
GWAS Study Type
7423 Participants
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Chapter I

Publication Details

Comprehensive information about this research publication

Authors

OS
Oh SW
LJ
Lee JE
SE
Shin E
KH
Kwon H
CE
Choe EK
CS
Choi SY
RH
Rhee H
CS
Choi SH
Chapter II

Abstract

Summary of the research findings

Metabolic syndrome (MetS) which is caused by obesity and insulin resistance, is well known for its predictive capability for the risk of type 2 diabetes mellitus and cardiovascular disease. The development of MetS is associated with multiple genetic factors, environmental factors and lifestyle. We performed a genome-wide association study to identify single-nucleotide polymorphism (SNP) related to MetS in large Korean population based samples of 1,362 subjects with MetS and 6,061 controls using the Axiom® Korean Biobank Array 1.0. We replicated the data in another sample including 502 subjects with MetS and 1,751 controls. After adjusting for age and sex, rs662799 located in the APOA5 gene were significantly associated with MetS. 15 SNPs in GCKR, C2orf16, APOA5, ZPR1, and BUD13 were associated with high triglyceride (TG). 14 SNPs in APOA5, ALDH1A2, LIPC, HERPUD1, and CETP, and 2 SNPs in MTNR1B were associated with low high density lipoprotein cholesterol (HDL-C) and high fasting blood glucose respectively. Among these SNPs, 6 TG SNPs: rs1260326, rs1260333, rs1919127, rs964184, rs2075295 and rs1558861 and 11 HDL-C SNPs: rs4775041, rs10468017, rs1800588, rs72786786, rs173539, rs247616, rs247617, rs3764261, rs4783961, rs708272, and rs7499892 were first discovered in Koreans. Additional research is needed to confirm these 17 novel SNPs in Korean population.

1,362 Korean ancestry cases, 6,061 Korean ancestry controls

Chapter III

Study Statistics

Key metrics and study information

7423
Total Participants
GWAS
Study Type
No
Replicated
East Asian
Ancestry
Republic of Korea
Recruitment Country
Chapter IV

Analysis

Comprehensive review of health and genetic findings

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