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GWAS Study

Genome-wide association study in almost 195,000 individuals identifies 50 previously unidentified genetic loci for eye color.

Simcoe M, Valdes A, Liu F et al.

33692100 PubMed ID
GWAS Study Type
194622 Participants
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Chapter I

Publication Details

Comprehensive information about this research publication

Authors

SM
Simcoe M
VA
Valdes A
LF
Liu F
FN
Furlotte NA
ED
Evans DM
HG
Hemani G
RS
Ring SM
SG
Smith GD
DD
Duffy DL
ZG
Zhu G
GS
Gordon SD
MS
Medland SE
VD
Vuckovic D
GG
Girotto G
SC
Sala C
CE
Catamo E
CM
Concas MP
BM
Brumat M
GP
Gasparini P
TD
Toniolo D
CM
Cocca M
RA
Robino A
YS
Yazar S
HA
Hewitt A
WW
Wu W
KP
Kraft P
HC
Hammond CJ
SY
Shi Y
CY
Chen Y
ZC
Zeng C
KC
Klaver CCW
UA
Uitterlinden AG
IM
Ikram MA
HM
Hamer MA
VD
van Duijn CM
NT
Nijsten T
HJ
Han J
MD
Mackey DA
MN
Martin NG
CC
Cheng CY
HD
Hinds DA
ST
Spector TD
KM
Kayser M
HP
Hysi PG
Chapter II

Abstract

Summary of the research findings

Human eye color is highly heritable, but its genetic architecture is not yet fully understood. We report the results of the largest genome-wide association study for eye color to date, involving up to 192,986 European participants from 10 populations. We identify 124 independent associations arising from 61 discrete genomic regions, including 50 previously unidentified. We find evidence for genes involved in melanin pigmentation, but we also find associations with genes involved in iris morphology and structure. Further analyses in 1636 Asian participants from two populations suggest that iris pigmentation variation in Asians is genetically similar to Europeans, albeit with smaller effect sizes. Our findings collectively explain 53.2% (95% confidence interval, 45.4 to 61.0%) of eye color variation using common single-nucleotide polymorphisms. Overall, our study outcomes demonstrate that the genetic complexity of human eye color considerably exceeds previous knowledge and expectations, highlighting eye color as a genetically highly complex human trait.

157,485 European ancestry individuals

Chapter III

Study Statistics

Key metrics and study information

194622
Total Participants
GWAS
Study Type
Yes
Replicated
35,501 European ancestry individuals, 959 Han Chinese ancestry individuals, 677 Indian ancestry individuals
Replication Participants
European, East Asian, South Asian
Ancestry
Italy, Netherlands, U.K., U.S., Australia, Singapore
Recruitment Country
Chapter IV

Analysis

Comprehensive review of health and genetic findings

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Analysis In Progress

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