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GWAS Study

A genome-wide association study suggests correlations of common genetic variants with peritoneal solute transfer rates in patients with kidney failure receiving peritoneal dialysis.

Mehrotra R, Stanaway IB, Jarvik GP et al.

34197840 PubMed ID
GWAS Study Type
2212 Participants
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Chapter I

Publication Details

Comprehensive information about this research publication

Authors

MR
Mehrotra R
SI
Stanaway IB
JG
Jarvik GP
LM
Lambie M
MJ
Morelle J
PJ
Perl J
HJ
Himmelfarb J
HO
Heimburger O
JD
Johnson DW
IT
Imam TH
RB
Robinson B
SP
Stenvinkel P
DO
Devuyst O
DS
Davies SJ
Chapter II

Abstract

Summary of the research findings

Movement of solutes across the peritoneum allows for the use of peritoneal dialysis to treat kidney failure. However, there is a large inter-individual variability in the peritoneal solute transfer rate (PSTR). Here, we tested the hypothesis that common genetic variants are associated with variability in PSTR. Of the 3561 participants from 69 centers in six countries, 2850 with complete data were included in a genome-wide association study. PSTR was defined as the four-hour dialysate/plasma creatinine ratio from the first peritoneal equilibration test after starting PD. Heritability of PSTR was estimated using genomic-restricted maximum-likelihood analysis, and the association of PSTR with a genome-wide polygenic risk score was also tested. The mean four-hour dialysate/plasma creatinine ratio in participants was 0.70. In 2212 participants of European ancestry, no signal reached genome-wide significance but 23 single nucleotide variants at four loci demonstrated suggestive associations with PSTR. Meta-analysis of ancestry-stratified regressions in 2850 participants revealed five single-nucleotide variants at four loci with suggestive correlations with PSTR. Association across ancestry strata was consistent for rs28644184 at the KDM2B locus. The estimated heritability of PSTR was 19%, and a permuted model polygenic risk score was significantly associated with PSTR. Thus, this genome-wide association study of patients receiving peritoneal dialysis bolsters evidence for a genetic contribution to inter-individual variability in PSTR.

2,212 European ancestry individuals

Chapter III

Study Statistics

Key metrics and study information

2212
Total Participants
GWAS
Study Type
No
Replicated
European, African unspecified, Asian unspecified, Native American
Ancestry
Canada, Sweden, U.S., Belgium, U.K., Australia
Recruitment Country
Chapter IV

Analysis

Comprehensive review of health and genetic findings

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