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GWAS Study

Genome-wide association study of liver enzyme elevation in an extended cohort of rheumatoid arthritis patients starting low-dose methotrexate.

Cavalli M, Eriksson N, Sundbaum JK et al.

36070248 PubMed ID
GWAS Study Type
346 Participants
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Chapter I

Publication Details

Comprehensive information about this research publication

Authors

CM
Cavalli M
EN
Eriksson N
SJ
Sundbaum JK
WM
Wallenberg M
KH
Kohnke H
BE
Baecklund E
HP
Hallberg P
WM
Wadelius M
Chapter II

Abstract

Summary of the research findings

Aim: A follow-up genome-wide association study (GWAS) in an extended cohort of rheumatoid arthritis (RA) patients starting low-dose methotrexate (MTX) treatment was performed to identify further genetic variants associated with alanine aminotransferase (ALT) elevation. Patients & methods: A GWAS was performed on 346 RA patients. Two outcomes within the first 6 months of MTX treatment were assessed: ALT >1.5-times the upper level of normal (ULN) and maximum level of ALT. Results: SPATA9 (rs72783407) was significantly associated with maximum level of ALT (p = 2.58 × 10-8) and PLCG2 (rs60427389) was tentatively associated with ALT >1.5 × ULN. Conclusion: Associations with SNPs in genes related to male fertility (SPATA9) and inflammatory processes (PLCG2) were identified.

346 Swedish ancestry individuals

Chapter III

Study Statistics

Key metrics and study information

346
Total Participants
GWAS
Study Type
No
Replicated
European
Ancestry
Sweden
Recruitment Country
Chapter IV

Analysis

Comprehensive review of health and genetic findings

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