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GWAS Study

Whole genome sequence analysis of blood lipid levels in >66,000 individuals.

Selvaraj MS, Li X, Li Z et al.

36220816 PubMed ID
GWAS Study Type
536500 Participants
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Chapter I

Publication Details

Comprehensive information about this research publication

Authors

SM
Selvaraj MS
LX
Li X
LZ
Li Z
PA
Pampana A
ZD
Zhang DY
PJ
Park J
AS
Aslibekyan S
BJ
Bis JC
BJ
Brody JA
CB
Cade BE
CL
Chuang LM
CR
Chung RH
CJ
Curran JE
DL
de las Fuentes L
DV
de Vries PS
DR
Duggirala R
FB
Freedman BI
GM
Graff M
GX
Guo X
HN
Heard-Costa N
HB
Hidalgo B
HC
Hwu CM
IM
Irvin MR
KT
Kelly TN
KB
Kral BG
LL
Lange L
LX
Li X
LM
Lisa M
LS
Lubitz SA
MA
Manichaikul AW
MP
Michael P
MM
Montasser ME
MA
Morrison AC
NT
Naseri T
OJ
O'Connell JR
PN
Palmer ND
PP
Peyser PA
RM
Reupena MS
SJ
Smith JA
SX
Sun X
TK
Taylor KD
TR
Tracy RP
TM
Tsai MY
WZ
Wang Z
WY
Wang Y
BW
Bao W
WJ
Wilkins JT
YL
Yanek LR
ZW
Zhao W
AD
Arnett DK
BJ
Blangero J
BE
Boerwinkle E
BD
Bowden DW
CY
Chen YI
CA
Correa A
CL
Cupples LA
DS
Dutcher SK
EP
Ellinor PT
FM
Fornage M
GS
Gabriel S
GS
Germer S
GR
Gibbs R
HJ
He J
KR
Kaplan RC
KS
Kardia SLR
KR
Kim R
KC
Kooperberg C
LR
Loos RJF
VK
Viaud-Martinez KA
MR
Mathias RA
MS
McGarvey ST
MB
Mitchell BD
ND
Nickerson D
NK
North KE
PB
Psaty BM
RS
Redline S
RA
Reiner AP
VR
Vasan RS
RS
Rich SS
WC
Willer C
RJ
Rotter JI
RD
Rader DJ
LX
Lin X
PG
Peloso GM
NP
Natarajan P
Chapter II

Abstract

Summary of the research findings

Blood lipids are heritable modifiable causal factors for coronary artery disease. Despite well-described monogenic and polygenic bases of dyslipidemia, limitations remain in discovery of lipid-associated alleles using whole genome sequencing (WGS), partly due to limited sample sizes, ancestral diversity, and interpretation of clinical significance. Among 66,329 ancestrally diverse (56% non-European) participants, we associate 428M variants from deep-coverage WGS with lipid levels; ~400M variants were not assessed in prior lipids genetic analyses. We find multiple lipid-related genes strongly associated with blood lipids through analysis of common and rare coding variants. We discover several associated rare non-coding variants, largely at Mendelian lipid genes. Notably, we observe rare LDLR intronic variants associated with markedly increased LDL-C, similar to rare LDLR exonic variants. In conclusion, we conducted a systematic whole genome scan for blood lipids expanding the alleles linked to lipids for multiple ancestries and characterize a clinically-relevant rare non-coding variant model for lipids.

29,502 European ancestry individuals, 16,983 Black individuals, 13,943 Hispanic individuals, 4,719 Asian ancestry individuals, 1,182 Samoan ancestry individuals

Chapter III

Study Statistics

Key metrics and study information

536500
Total Participants
GWAS
Study Type
Yes
Replicated
387,629 European ancestry individuals, 10,139 Black individuals, 500 Asian ancestry individuals, 96 South Asian ancestry individuals, 59 East Asian ancestry individuals, 71,748 individuals
Replication Participants
European, African unspecified, African American or Afro-Caribbean, Hispanic or Latin American, Asian unspecified, Oceanian, African unspecified, South Asian, East Asian
Ancestry
U.S., China, Taiwan, Samoa, U.K.
Recruitment Country
Chapter IV

Analysis

Comprehensive review of health and genetic findings

Important Disclaimer: This review has been performed semi-automatically and is provided for informational purposes only. While we strive for accuracy, this analysis may contain errors, omissions, or misinterpretations of the original research. DNA Genics disclaims all liability for any inaccuracies, errors, or consequences arising from the use of this information. Users should independently verify all information and consult original research publications before making any decisions based on this content. This analysis is not intended as a substitute for professional scientific review or medical advice.

Analysis In Progress

Our analysis of this publication is currently being prepared. Please check back soon for comprehensive insights into the health and genetic findings discussed in this research.