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GWAS Study

Genetic regulators of sputum mucin concentration and their associations with COPD phenotypes.

Van Buren E, Radicioni G, Lester S et al.

37352370 PubMed ID
GWAS Study Type
215 Participants
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Chapter I

Publication Details

Comprehensive information about this research publication

Authors

VB
Van Buren E
RG
Radicioni G
LS
Lester S
OW
O'Neal WK
DH
Dang H
KS
Kasela S
GS
Garudadri S
CJ
Curtis JL
HM
Han MK
KJ
Krishnan JA
WE
Wan ES
SE
Silverman EK
HA
Hastie A
OV
Ortega VE
LT
Lappalainen T
NM
Nawijn MC
BM
Berge MVD
CS
Christenson SA
LY
Li Y
CM
Cho MH
KM
Kesimer M
KS
Kelada SNP
Chapter II

Abstract

Summary of the research findings

Hyper-secretion and/or hyper-concentration of mucus is a defining feature of multiple obstructive lung diseases, including chronic obstructive pulmonary disease (COPD). Mucus itself is composed of a mixture of water, ions, salt and proteins, of which the gel-forming mucins, MUC5AC and MUC5B, are the most abundant. Recent studies have linked the concentrations of these proteins in sputum to COPD phenotypes, including chronic bronchitis (CB) and acute exacerbations (AE). We sought to determine whether common genetic variants influence sputum mucin concentrations and whether these variants are also associated with COPD phenotypes, specifically CB and AE. We performed a GWAS to identify quantitative trait loci for sputum mucin protein concentration (pQTL) in the Sub-Populations and InteRmediate Outcome Measures in COPD Study (SPIROMICS, n = 708 for total mucin, n = 215 for MUC5AC, MUC5B). Subsequently, we tested for associations of mucin pQTL with CB and AE using regression modeling (n = 822-1300). Replication analysis was conducted using data from COPDGene (n = 5740) and by examining results from the UK Biobank. We identified one genome-wide significant pQTL for MUC5AC (rs75401036) and two for MUC5B (rs140324259, rs10001928). The strongest association for MUC5B, with rs140324259 on chromosome 11, explained 14% of variation in sputum MUC5B. Despite being associated with lower MUC5B, the C allele of rs140324259 conferred increased risk of CB (odds ratio (OR) = 1.42; 95% confidence interval (CI): 1.10-1.80) as well as AE ascertained over three years of follow up (OR = 1.41; 95% CI: 1.02-1.94). Associations between rs140324259 and CB or AE did not replicate in COPDGene. However, in the UK Biobank, rs140324259 was associated with phenotypes that define CB, namely chronic mucus production and cough, again with the C allele conferring increased risk. We conclude that sputum MUC5AC and MUC5B concentrations are associated with common genetic variants, and the top locus for MUC5B may influence COPD phenotypes, in particular CB.

215 European ancestry individuals

Chapter III

Study Statistics

Key metrics and study information

215
Total Participants
GWAS
Study Type
No
Replicated
European, African American or Afro-Caribbean
Ancestry
U.S.
Recruitment Country
Chapter IV

Analysis

Comprehensive review of health and genetic findings

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