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GWAS Study

Comparative analysis of the Mexico City Prospective Study and the UK Biobank identifies ancestry-specific effects on clonal hematopoiesis.

Wen S, Kuri-Morales P, Hu F et al.

39948438 PubMed ID
GWAS Study Type
525252 Participants
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Chapter I

Publication Details

Comprehensive information about this research publication

Authors

WS
Wen S
KP
Kuri-Morales P
HF
Hu F
NA
Nag A
TI
Tachmazidou I
DS
Deevi SVV
TH
Taiy H
SK
Smith KR
LD
Loesch DP
BO
Burren OS
DR
Dhindsa RS
WS
Wasilewski S
AJ
Alegre-Díaz J
BJ
Berumen J
EJ
Emberson J
TJ
Torres JM
CR
Collins R
CK
Carss K
WQ
Wang Q
PS
Petrovski S
TR
Tapia-Conyer R
FM
Fabre MA
HA
Harper AR
VG
Vassiliou GS
MJ
Mitchell J
Chapter II

Abstract

Summary of the research findings

The impact of genetic ancestry on the development of clonal hematopoiesis (CH) remains largely unexplored. Here, we compared CH in 136,401 participants from the Mexico City Prospective Study (MCPS) to 416,118 individuals from the UK Biobank (UKB) and observed CH to be significantly less common in MCPS compared to UKB (adjusted odds ratio = 0.59, 95% confidence interval (CI) = [0.57, 0.61], P = 7.31 × 10-185). Among MCPS participants, CH frequency was positively correlated with the percentage of European ancestry (adjusted beta = 0.84, 95% CI = [0.66, 1.03], P = 7.35 × 10-19). Genome-wide and exome-wide association analyses in MCPS identified ancestry-specific variants in the TCL1B locus with opposing effects on DNMT3A-CH versus non-DNMT3A-CH. Meta-analysis of MCPS and UKB identified five novel loci associated with CH, including polymorphisms at PARP11/CCND2, MEIS1 and MYCN. Our CH study, the largest in a non-European population to date, demonstrates the power of cross-ancestry comparisons to derive novel insights into CH pathogenesis.

133,441 Hispanic or Latin American individuals, 391,811 European ancestry individuals

Chapter III

Study Statistics

Key metrics and study information

525252
Total Participants
GWAS
Study Type
No
Replicated
Hispanic or Latin American, European
Ancestry
Mexico, U.K.
Recruitment Country
Chapter IV

Analysis

Comprehensive review of health and genetic findings

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Analysis In Progress

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