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GWAS Study

A genome-wide association study of autism reveals a common novel risk locus at 5p14.1.

Ma D, Salyakina D, Jaworski JM et al.

19456320 PubMed ID
GWAS Study Type
3780 Participants
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Chapter I

Publication Details

Comprehensive information about this research publication

Authors

MD
Ma D
SD
Salyakina D
JJ
Jaworski JM
KI
Konidari I
WP
Whitehead PL
AA
Andersen AN
HJ
Hoffman JD
SS
Slifer SH
HD
Hedges DJ
CH
Cukier HN
GA
Griswold AJ
MJ
McCauley JL
BG
Beecham GW
WH
Wright HH
AR
Abramson RK
ME
Martin ER
HJ
Hussman JP
GJ
Gilbert JR
CM
Cuccaro ML
HJ
Haines JL
PM
Pericak-Vance MA
Chapter II

Abstract

Summary of the research findings

Although autism is one of the most heritable neuropsychiatric disorders, its underlying genetic architecture has largely eluded description. To comprehensively examine the hypothesis that common variation is important in autism, we performed a genome-wide association study (GWAS) using a discovery dataset of 438 autistic Caucasian families and the Illumina Human 1M beadchip. 96 single nucleotide polymorphisms (SNPs) demonstrated strong association with autism risk (p-value < 0.0001). The validation of the top 96 SNPs was performed using an independent dataset of 487 Caucasian autism families genotyped on the 550K Illumina BeadChip. A novel region on chromosome 5p14.1 showed significance in both the discovery and validation datasets. Joint analysis of all SNPs in this region identified 8 SNPs having improved p-values (3.24E-04 to 3.40E-06) than in either dataset alone. Our findings demonstrate that in addition to multiple rare variations, part of the complex genetic architecture of autism involves common variation.

1,390 European ancestry individuals from 438 families

Chapter III

Study Statistics

Key metrics and study information

3780
Total Participants
GWAS
Study Type
Yes
Replicated
2,390 European ancestry individuals from 457 families
Replication Participants
European
Ancestry
U.S.
Recruitment Country
Chapter IV

Analysis

Comprehensive review of health and genetic findings

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