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GWAS Study

Genome-wide association study identifies a locus at 7p15.2 associated with endometriosis.

Painter JN, Anderson CA, Nyholt DR et al.

21151130 PubMed ID
GWAS Study Type
14917 Participants
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Chapter I

Publication Details

Comprehensive information about this research publication

Authors

PJ
Painter JN
AC
Anderson CA
ND
Nyholt DR
MS
Macgregor S
LJ
Lin J
LS
Lee SH
LA
Lambert A
ZZ
Zhao ZZ
RF
Roseman F
GQ
Guo Q
GS
Gordon SD
WL
Wallace L
HA
Henders AK
VP
Visscher PM
KP
Kraft P
MN
Martin NG
MA
Morris AP
TS
Treloar SA
KS
Kennedy SH
MS
Missmer SA
MG
Montgomery GW
ZK
Zondervan KT
Chapter II

Abstract

Summary of the research findings

Endometriosis is a common gynecological disease associated with pelvic pain and subfertility. We conducted a genome-wide association study (GWAS) in 3,194 individuals with surgically confirmed endometriosis (cases) and 7,060 controls from Australia and the UK. Polygenic predictive modeling showed significantly increased genetic loading among 1,364 cases with moderate to severe endometriosis. The strongest association signal was on 7p15.2 (rs12700667) for 'all' endometriosis (P = 2.6 × 10⁻⁷, odds ratio (OR) = 1.22, 95% CI 1.13-1.32) and for moderate to severe disease (P = 1.5 × 10⁻⁹, OR = 1.38, 95% CI 1.24-1.53). We replicated rs12700667 in an independent cohort from the United States of 2,392 self-reported, surgically confirmed endometriosis cases and 2,271 controls (P = 1.2 × 10⁻³, OR = 1.17, 95% CI 1.06-1.28), resulting in a genome-wide significant P value of 1.4 × 10⁻⁹ (OR = 1.20, 95% CI 1.13-1.27) for 'all' endometriosis in our combined datasets of 5,586 cases and 9,331 controls. rs12700667 is located in an intergenic region upstream of the plausible candidate genes NFE2L3 and HOXA10.

3,194 European ancestry cases, 7,060 European ancestry controls

Chapter III

Study Statistics

Key metrics and study information

14917
Total Participants
GWAS
Study Type
Yes
Replicated
2,392 European ancestry cases, 2,271 European ancestry controls
Replication Participants
European
Ancestry
U.S., Australia, U.K.
Recruitment Country
Chapter IV

Analysis

Comprehensive review of health and genetic findings

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Analysis In Progress

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