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GWAS Study

Nonsense mutation in the LGR4 gene is associated with several human diseases and other traits.

Styrkarsdottir U, Thorleifsson G, Sulem P et al.

23644456 PubMed ID
GWAS Study Type
73965 Participants
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Chapter I

Publication Details

Comprehensive information about this research publication

Authors

SU
Styrkarsdottir U
TG
Thorleifsson G
SP
Sulem P
GD
Gudbjartsson DF
SA
Sigurdsson A
JA
Jonasdottir A
JA
Jonasdottir A
OA
Oddsson A
HA
Helgason A
MO
Magnusson OT
WG
Walters GB
FM
Frigge ML
HH
Helgadottir HT
JH
Johannsdottir H
BK
Bergsteinsdottir K
OM
Ogmundsdottir MH
CJ
Center JR
NT
Nguyen TV
EJ
Eisman JA
CC
Christiansen C
SE
Steingrimsson E
JJ
Jonasson JG
TL
Tryggvadottir L
EG
Eyjolfsson GI
TA
Theodors A
JT
Jonsson T
IT
Ingvarsson T
OI
Olafsson I
RT
Rafnar T
KA
Kong A
SG
Sigurdsson G
MG
Masson G
TU
Thorsteinsdottir U
SK
Stefansson K
Chapter II

Abstract

Summary of the research findings

Low bone mineral density (BMD) is used as a parameter of osteoporosis. Genome-wide association studies of BMD have hitherto focused on BMD as a quantitative trait, yielding common variants of small effects that contribute to the population diversity in BMD. Here we use BMD as a dichotomous trait, searching for variants that may have a direct effect on the risk of pathologically low BMD rather than on the regulation of BMD in the healthy population. Through whole-genome sequencing of Icelandic individuals, we found a rare nonsense mutation within the leucine-rich-repeat-containing G-protein-coupled receptor 4 (LGR4) gene (c.376C>T) that is strongly associated with low BMD, and with osteoporotic fractures. This mutation leads to termination of LGR4 at position 126 and fully disrupts its function. The c.376C>T mutation is also associated with electrolyte imbalance, late onset of menarche and reduced testosterone levels, as well as an increased risk of squamous cell carcinoma of the skin and biliary tract cancer. Interestingly, the phenotype of carriers of the c.376C>T mutation overlaps that of Lgr4 mutant mice.

4,931 European ancestry cases, 69,034 European ancestry controls

Chapter III

Study Statistics

Key metrics and study information

73965
Total Participants
GWAS
Study Type
No
Replicated
European
Ancestry
Iceland
Recruitment Country
Chapter IV

Analysis

Comprehensive review of health and genetic findings

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Analysis In Progress

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