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GWAS Study

Susceptibility to tuberculosis is associated with variants in the ASAP1 gene encoding a regulator of dendritic cell migration.

Curtis J, Luo Y, Zenner HL et al.

25774636 PubMed ID
GWAS Study Type
19724 Participants
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Chapter I

Publication Details

Comprehensive information about this research publication

Authors

CJ
Curtis J
LY
Luo Y
ZH
Zenner HL
CD
Cuchet-Lourenço D
WC
Wu C
LK
Lo K
MM
Maes M
AA
Alisaac A
SE
Stebbings E
LJ
Liu JZ
KL
Kopanitsa L
IO
Ignatyeva O
BY
Balabanova Y
NV
Nikolayevskyy V
BI
Baessmann I
TT
Thye T
MC
Meyer CG
NP
Nürnberg P
HR
Horstmann RD
DF
Drobniewski F
PV
Plagnol V
BJ
Barrett JC
NS
Nejentsev S
Chapter II

Abstract

Summary of the research findings

Human genetic factors predispose to tuberculosis (TB). We studied 7.6 million genetic variants in 5,530 people with pulmonary TB and in 5,607 healthy controls. In the combined analysis of these subjects and the follow-up cohort (15,087 TB patients and controls altogether), we found an association between TB and variants located in introns of the ASAP1 gene on chromosome 8q24 (P = 2.6 × 10(-11) for rs4733781; P = 1.0 × 10(-10) for rs10956514). Dendritic cells (DCs) showed high ASAP1 expression that was reduced after Mycobacterium tuberculosis infection, and rs10956514 was associated with the level of reduction of ASAP1 expression. The ASAP1 protein is involved in actin and membrane remodeling and has been associated with podosomes. The ASAP1-depleted DCs showed impaired matrix degradation and migration. Therefore, genetically determined excessive reduction of ASAP1 expression in M. tuberculosis-infected DCs may lead to their impaired migration, suggesting a potential mechanism of predisposition to TB.

5,530 European ancestry cases, 5,607 European ancestry controls

Chapter III

Study Statistics

Key metrics and study information

19724
Total Participants
GWAS
Study Type
Yes
Replicated
1,085 Russian ancestry cases, 2,865 Russian ancestry controls, 2,277 Sub-Saharan African ancestry cases, 2,360 Sub-Saharan African ancestry controls
Replication Participants
Sub-Saharan African, European, Other
Ancestry
Ghana, Gambia, Russian Federation
Recruitment Country
Chapter IV

Analysis

Comprehensive review of health and genetic findings

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Analysis In Progress

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