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GWAS Study

Genome-Wide Association Study of Psychosis Proneness in the Finnish Population.

Ortega-Alonso A, Ekelund J, Sarin AP et al.

28525603 PubMed ID
GWAS Study Type
3967 Participants
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Chapter I

Publication Details

Comprehensive information about this research publication

Authors

OA
Ortega-Alonso A
EJ
Ekelund J
SA
Sarin AP
MJ
Miettunen J
VJ
Veijola J
JM
Järvelin MR
HW
Hennah W
Chapter II

Abstract

Summary of the research findings

The current study examined quantitative measures of psychosis proneness in a nonpsychotic population, in order to elucidate their underlying genetic architecture and to observe if there is any commonality to that already detected in the studies of individuals with overt psychotic conditions, such as schizophrenia and bipolar disorder. Heritability, univariate and multivariate genome-wide association (GWAs) tests, including a series of comprehensive gene-based association analyses, were developed in 4269 nonpsychotic persons participating in the Northern Finland Birth Cohort 1966 study with information on the following psychometric measures: Hypomanic Personality, Perceptual Aberration, Physical and Social Anhedonia (also known as Chapman's Schizotypia scales), and Schizoidia scale. Genome-wide genetic data was available for ~9.84 million SNPs. Heritability estimates ranged from 16% to 27%. Phenotypic, genetic and environmental correlations ranged from 0.04-0.43, 0.25-0.73, and 0.12-0.43, respectively. Univariate GWAs tests revealed an intronic SNP (rs12449097) at the TMC7 gene (16p12.3) that significantly associated (P = 3.485 × 10-8) with the hypomanic scale. Bivariate GWAs tests including the hypomanic and physical anhedonia scales suggested a further borderline significant SNP (rs188320715; P-value = 5.261 × 10-8, ~572 kb downstream the ARID1B gene at 6q25.3). Gene-based tests highlighted 20 additional genes of which 5 had previously been associated to schizophrenia and/or bipolar disorder: CSMD1, CCDC141, SLC1A2, CACNA1C, and SNAP25. Altogether the findings explained from 3.7% to 14.1% of the corresponding trait heritability. In conclusion, this study provides preliminary genomic evidence suggesting that qualitatively similar biological factors may underlie different psychosis proneness measures, some of which could further predispose to schizophrenia and bipolar disorder.

3,967 Finnish ancestry individuals

Chapter III

Study Statistics

Key metrics and study information

3967
Total Participants
GWAS
Study Type
No
Replicated
European
Ancestry
Finland
Recruitment Country
Chapter IV

Analysis

Comprehensive review of health and genetic findings

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