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mtDNA Haplogroup • Maternal Lineage

HV13A

mtDNA Haplogroup HV13A

~6,000 years ago
Near East / Western Asia
0 subclades
1 ancient samples
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Chapter I

The Story

The journey of mtDNA haplogroup HV13A

Origins and Evolution

mtDNA haplogroup HV13A is a downstream lineage of HV13, itself part of the broader HV/H clade that branches from the R0/R macro-haplogroup. Based on the phylogenetic position of HV13 and the geographic pattern of related lineages, HV13A most likely formed in the Near East or adjacent Western Asia during the early Holocene (a few thousand years after the Last Glacial Maximum). Its emergence is plausibly tied to localized postglacial population growth and the demographic expansions associated with early farming communities spreading from West Asia into Anatolia, the Caucasus and the Mediterranean.

Because HV13A is a relatively low-frequency clade with limited internal diversification seen in modern sampling, its pattern is consistent with a regional founder event or a small number of maternal founders followed by restricted local expansion. The single documented ancient DNA occurrence attributed to HV13/HV13A-class lineages suggests antiquity in archaeological contexts but limited broad demographic impact compared with high-frequency West Eurasian maternal haplogroups like H or J.

Subclades

HV13A is itself a subclade of HV13. At present, published and public-sequence datasets indicate limited further sub-branching within HV13A, with few or no widely distributed downstream clades. That scarcity of internal branches suggests either a recent origin relative to deeper haplogroups or survival in demes with low effective female population sizes. Future dense mitogenome sampling in the Caucasus, Anatolia, and southern Europe may reveal additional minor subclades.

Geographical Distribution

The modern distribution of HV13A is geographically focused on the eastern Mediterranean and adjacent regions. Higher relative frequencies appear in the Caucasus and Anatolia, while lower, patchy frequencies are observed in southern Europe (Italy, Balkans), the Levant, and coastal North Africa. Very occasional occurrences in Central and South Asia most likely reflect long-distance dispersal, historical contacts, or later population movements rather than a primary origin there. The distribution aligns with models of Neolithic and post-Neolithic maternal gene flow from West Asia into Europe and the Mediterranean basin.

Historical and Cultural Significance

Although HV13A is not a high-frequency marker of any single large archaeological culture, its presence is consistent with Neolithic expansions of farming populations originating in Anatolia and the Levant. It may also have been carried in smaller numbers during later Bronze Age and Iron Age movements, regional trade, and historical migrations across the Mediterranean and into the Caucasus. Its localized concentration in the Caucasus and Anatolia suggests relevance for studies of maternal ancestry in those regions and for reconstructing finer-scale female-mediated demographic events.

Conclusion

HV13A represents a narrowly distributed, regionally informative maternal lineage rooted in the Near East/Western Asia during the early Holocene. Its rarity and limited substructure make it useful for tracing localized maternal ancestry and for complementing broader demographic reconstructions of postglacial and Neolithic dispersals into Anatolia, the Caucasus and southern Europe. Continued mitogenome sequencing of under-sampled populations and ancient remains will clarify its internal diversity, exact age, and historic trajectories.

Key Points

  • Origins and Evolution
  • Subclades
  • Geographical Distribution
  • Historical and Cultural Significance
  • Conclusion
Chapter II

Tree & Relationships

Phylogenetic context and subclades

Evolution Path

This haplogroup's evolutionary journey from its earliest ancestor to the present.

Steps Haplogroup Age Estimate Archaeology Era Time Passed Immediate Descendants Tested Modern Descendants Ancient Connections
1 HV13A Current ~6,000 years ago 🪨 Chalcolithic 6,000 years 0 0 1
2 HV13 ~9,000 years ago 🌾 Neolithic 9,000 years 2 2 0
3 HV1 ~25,000 years ago 🦴 Paleolithic 25,000 years 12 100 0
4 HV ~30,000 years ago 🦴 Paleolithic 30,000 years 10 7,905 228
5 R ~60,000 years ago 🦴 Paleolithic 60,000 years 12 10,987 57
6 N ~60,000 years ago 🦴 Paleolithic 60,000 years 15 15,452 13
7 L3 ~70,000 years ago 🦴 Paleolithic 70,000 years 11 17,621 6
8 L ~160,000 years ago 🦴 Paleolithic 160,000 years 7 18,987 5

Subclades (0)

Terminal branch - no known subclades

Siblings (1)

Other branches from the same parent haplogroup

Chapter III

Where in the World

Geographic distribution and modern presence

Place of Origin

Near East / Western Asia

Modern Distribution

The populations where mtDNA haplogroup HV13A is found include:

  1. Caucasus populations (Armenia, Georgia, Azerbaijan)
  2. Anatolian / Turkish populations
  3. Southern European populations (Italy, Balkans)
  4. Levantine populations at low frequencies (Lebanon, Syria)
  5. North African populations at low frequencies (coastal regions)
  6. Central and South Asian populations at very low frequencies (reflecting long-distance dispersal or historic contacts)
  7. Diaspora and mixed Mediterranean populations (sporadic findings in modern sampling)
CHAPTER IV

When in Time

Your haplogroup in the context of human history

~10k years ago

Neolithic Revolution

Agriculture begins, settled communities form

~6k years ago

Haplogroup HV13A

Your mtDNA haplogroup emerged in Near East / Western Asia

Near East / Western Asia
~5k years ago

Bronze Age

Metalworking, writing, and early civilizations

~3k years ago

Iron Age

Iron tools, expanded trade networks

~2k years ago

Classical Antiquity

Greek and Roman civilizations flourish

Present

Present Day

Modern era

Your Haplogroup
Historical Era
Chapter IV-B

Linked Cultures

Ancient cultures associated with mtDNA haplogroup HV13A

Cultural Heritage

These ancient cultures have been linked to haplogroup HV13A based on matching ancient DNA samples from archaeological excavations. The presence of this haplogroup in these cultures provides insights into the migrations and population movements of populations carrying this haplogroup.

Butkara Culture Çamlıbel Tarlası Ganj Dareh Culture Geoksyur Culture Gonur Culture Iron Age Armenian Kangju Nubian Christian Parkhai Culture Sapalli Shah Tepe Culture
Culture assignments are based on archaeological context of ancient DNA samples and may represent regional associations during specific time periods.
Chapter V

Sample Catalog

Top 1 ancient DNA samples directly related to haplogroup HV13A or parent clades

1 / 1 samples
Portrait Sample Country Era Date Culture mtDNA Match
Portrait of ancient individual I17473 from Sudan, dated 650 CE - 1050 CE
I17473
Sudan Early Christian Era in Sudan 650 CE - 1050 CE Nubian Christian HV13a Direct
Chapter VI

Carrier Distribution Map

Geographic distribution of 1 ancient DNA samples carrying haplogroup HV13A

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Showing all samples
Each marker represents an ancient individual
Chapter VII

Temporal Distribution

Distribution of carriers across archaeological periods

Chapter VIII

Geographic Distribution

Distribution of carriers by country of origin

Chapter IX

Country × Era Distribution

Cross-tabulation of carrier countries and archaeological periods

Data

Data & Provenance

Source information and data quality

Last Updated 2026-02-16
Confidence Score 50/100
Coverage Low
Data Source

We use the latest phylotree for MTDNA haplogroup classification and data.