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mtDNA Haplogroup • Maternal Lineage

M9A1A1C1B1

mtDNA Haplogroup M9A1A1C1B1

~500 years ago
East Asia
1 subclades
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Chapter I

The Story

The journey of mtDNA haplogroup M9A1A1C1B1

Origins and Evolution

M9A1A1C1B1 is a shallow, recently derived subclade of M9A1A1C1B, itself nested within the broader East Asian M9 macro-haplogroup. The M9 lineage is a well-established East Asian maternal clade; downstream substructure such as M9A1A1C1 and its descendants represent localized diversification that occurred during the late Holocene. Given the parent clade's estimated age (~0.8 kya) and the shallow phylogenetic position of M9A1A1C1B1, a plausible origin for this subclade is within the last millennium (on the order of several hundred years), reflecting recent population dynamics, localized founder events, or historical-period mobility across East and adjacent Central Asia.

Subclades

As of current phylogenetic resolution, M9A1A1C1B1 appears to be a terminal or very shallow branch with limited documented downstream diversification. Where deeper sampling or high-resolution mitogenomes are available, small private branches or micro-subclades can be detected in specific regional or ethnic groups, but no widely distributed, well-differentiated child clades have been robustly defined for M9A1A1C1B1 in published public phylogenies. Continued mitogenome sequencing in under-sampled populations may reveal further substructure.

Geographical Distribution

The distribution of M9A1A1C1B1 mirrors that of its parent clade, concentrated in East and Northeast Asia with scattered presence in adjacent Central and northern Southeast Asia. It is typically found at low to moderate frequency in diverse groups including Han Chinese, Japanese, Korean, Tibetan and Tibetan‑adjacent highland groups, Mongolic and Inner Asian populations, some Central Asian groups (e.g., Kazakh, Uyghur at low frequency), northern Southeast Asian populations, and occasionally among Siberian and northeastern Eurasian hunter‑gatherer groups. The pattern suggests localized diversification with episodic gene flow tied to historical migrations and regional demographic processes rather than a single deep prehistoric expansion.

Historical and Cultural Significance

Because M9A1A1C1B1 likely arose in the last millennium, its presence in multiple East Asian and adjacent Central Asian populations is best interpreted in the context of historic-period population movements, trade networks, and imperial expansions (for example, medieval Chinese state expansion, steppe-based polities such as the Mongol Empire, and later regional migrations). Its low-to-moderate frequency and patchy distribution are consistent with founder effects, maternal line survival in specific families or clans, and recent admixture events rather than association with a single prehistoric archaeological culture.

Conclusion

M9A1A1C1B1 exemplifies a recent, regionally restricted mtDNA lineage within the East Asian M9 phylogeny. It is informative for high-resolution regional maternal lineage studies and can help trace recent maternal ancestry and historical gene flow across East, Northeast and adjacent Central Asia. As mitogenome sampling increases, especially from under-represented minority groups and historical-period contexts, the finer-scale phylogeny and distribution of M9A1A1C1B1 may become clearer.

Key Points

  • Origins and Evolution
  • Subclades
  • Geographical Distribution
  • Historical and Cultural Significance
  • Conclusion
Chapter II

Tree & Relationships

Phylogenetic context and subclades

Evolution Path

This haplogroup's evolutionary journey from its earliest ancestor to the present.

Steps Haplogroup Age Estimate Archaeology Era Time Passed Immediate Descendants Tested Modern Descendants Ancient Connections
1 M9A1A1C1B1 Current ~500 years ago 🏭 Modern 500 years 1 0 0
2 M9A1A1C1B ~800 years ago 🏰 Medieval 800 years 1 0 1
3 M9A1A1C1 ~2,000 years ago 🏰 Medieval 1,500 years 1 1 0
4 M9A1A1C ~2,000 years ago 🏛️ Roman Period 2,000 years 1 5 2
5 M9A1A1 ~4,000 years ago 🔶 Bronze Age 4,000 years 1 8 0
6 M9A1A ~6,000 years ago 🪨 Chalcolithic 6,000 years 2 13 6
7 M9A1 ~12,000 years ago 🌾 Neolithic 12,000 years 2 19 0
8 M9A ~22,000 years ago 🏹 Mesolithic 22,000 years 1 20 1
9 M9 ~30,000 years ago 🦴 Paleolithic 30,000 years 1 20 0
10 M ~60,000 years ago 🦴 Paleolithic 60,000 years 11 1,200 41
11 L3 ~70,000 years ago 🦴 Paleolithic 70,000 years 11 17,621 6
12 L ~160,000 years ago 🦴 Paleolithic 160,000 years 7 18,987 5
Chapter III

Where in the World

Geographic distribution and modern presence

Place of Origin

East Asia

Modern Distribution

The populations where mtDNA haplogroup M9A1A1C1B1 is found include:

  1. Han Chinese
  2. Japanese
  3. Korean
  4. Tibetan and Tibetan‑adjacent highland groups
  5. Mongolian and Inner Asian populations
  6. Central Asian groups (e.g., Kazakh, Uyghur — low to moderate frequency)
  7. Northern Southeast Asian populations (e.g., some Tai‑Kadai and Austroasiatic groups)
  8. Siberian and northeastern Eurasian hunter‑gatherer groups (low frequency)
  9. Regional minorities and isolated groups across East‑Central Asia
CHAPTER IV

When in Time

Your haplogroup in the context of human history

~10k years ago

Neolithic Revolution

Agriculture begins, settled communities form

~5k years ago

Bronze Age

Metalworking, writing, and early civilizations

~3k years ago

Iron Age

Iron tools, expanded trade networks

~2k years ago

Classical Antiquity

Greek and Roman civilizations flourish

~500 years ago

Haplogroup M9A1A1C1B1

Your mtDNA haplogroup emerged in East Asia

East Asia
Present

Present Day

Modern era

Your Haplogroup
Historical Era
Chapter IV-B

Linked Cultures

Ancient cultures associated with mtDNA haplogroup M9A1A1C1B1

Cultural Heritage

These ancient cultures have been linked to haplogroup M9A1A1C1B1 based on matching ancient DNA samples from archaeological excavations. The presence of this haplogroup in these cultures provides insights into the migrations and population movements of populations carrying this haplogroup.

Chaxiu Tang Early Iron Age Culture Gachong Culture Late Chalcolithic Culture Late Iron Age Culture Latuotanggu Culture Longsangquduo Culture Mebrak Culture
Culture assignments are based on archaeological context of ancient DNA samples and may represent regional associations during specific time periods.
Chapter V

Sample Catalog

Top 50 ancient DNA samples directly related to haplogroup M9A1A1C1B1 or parent clades

50 / 50 samples
Portrait Sample Country Era Date Culture mtDNA Match
Portrait of ancient individual I13692 from Taiwan, dated 1 CE - 800 CE
I13692
Taiwan Iron Age Taiwan 1 CE - 800 CE Taiwanese Iron M7c1c3 Direct
Portrait of ancient individual I14925 from Taiwan, dated 1 CE - 800 CE
I14925
Taiwan Iron Age Taiwan 1 CE - 800 CE Taiwanese Iron M7b1a2a1 Direct
Portrait of ancient individual I14927 from Taiwan, dated 1 CE - 800 CE
I14927
Taiwan Iron Age Taiwan 1 CE - 800 CE Taiwanese Iron M7b1a2a1 Direct
Portrait of ancient individual I2948 from Vietnam, dated 44 BCE - 61 CE
I2948
Vietnam Bronze Age Vietnam 44 BCE - 61 CE Dong Son Culture M8a2 Direct
Portrait of ancient individual I2948 from Vietnam, dated 44 BCE - 61 CE
I2948
Vietnam Bronze Age Vietnam 44 BCE - 61 CE Dong Son Culture M8a2 Direct
Portrait of ancient individual AMA004 from Indonesia, dated 51 BCE - 76 BCE
AMA004
Indonesia Early Bronze Age Indonesia 51 BCE - 76 BCE Early Bronze Indonesian M73a Direct
Portrait of ancient individual R67 from Italy, dated 100 CE - 300 CE
R67
Italy Imperial Rome 100 CE - 300 CE Roman Empire M Direct
Portrait of ancient individual L8671 from Uzbekistan, dated 150 BCE - 50 CE
L8671
Uzbekistan Iron Age Serkharakat Culture of Surkhandaryo 150 BCE - 50 CE Serkharakat Culture M5a Direct
Portrait of ancient individual C3315 from China, dated 152 BCE - 23 BCE
C3315
China Iron Age Caishichang, Xinjiang, China 152 BCE - 23 BCE Caishichang Culture M3 Direct
Portrait of ancient individual I6549 from Pakistan, dated 165 BCE - 2 BCE
I6549
Pakistan Butkara: Iron Age Religious and Cultural Center in Swat Valley, Pakistan 165 BCE - 2 BCE Butkara Culture M30 Direct
Chapter VI

Carrier Distribution Map

Geographic distribution of 100 ancient DNA samples carrying haplogroup M9A1A1C1B1

Time Period Filter
All Time Periods
Showing all samples
Each marker represents an ancient individual
Chapter VII

Temporal Distribution

Distribution of carriers across archaeological periods

Chapter VIII

Geographic Distribution

Distribution of carriers by country of origin

Chapter IX

Country × Era Distribution

Cross-tabulation of carrier countries and archaeological periods

Data

Data & Provenance

Source information and data quality

Last Updated 2026-02-16
Confidence Score 50/100
Coverage Low
Data Source

We use the latest phylotree for MTDNA haplogroup classification and data.