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mtDNA Haplogroup • Maternal Lineage

H3K1

mtDNA Haplogroup H3K1

~4,000 years ago
Iberian Peninsula / Atlantic Europe
1 subclades
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Chapter I

The Story

The journey of mtDNA haplogroup H3K1

Origins and Evolution

mtDNA haplogroup H3K1 is a downstream branch of H3K, itself a rare subclade of the widespread West‑Eurasian macro‑haplogroup H. Haplogroup H experienced major expansions in Europe during the Holocene associated with post‑glacial recolonization and later Neolithic and post‑Neolithic demographic processes. H3K has been inferred to have an Atlantic/Iberian origin in the mid‑Holocene (~5.5 kya for H3K), and H3K1 represents a subsequent, localized maternal lineage that likely diversified within the Iberian/Atlantic coastal milieu during the later Holocene (several thousand years after the origin of H3K).

The phylogenetic branching that led to H3K1 is consistent with restricted growth and regional persistence rather than a continent‑wide expansion: H3K1 is characterized by a limited number of observed lineages in modern and ancient DNA datasets, indicating a relatively small effective maternal population size since its origin.

Subclades

At present, H3K1 is a narrowly defined downstream clade of H3K with few currently documented subbranches. Published and public mtDNA databases and ancient DNA surveys report limited further internal structure for H3K1 compared with more common H subclades (for example H1 or H3 broadly). Continued high‑resolution mitogenome sequencing and denser sampling of Iberian and Atlantic populations may reveal additional sublineages; however, as of current data H3K1 behaves like a localized, low‑diversity maternal lineage.

Geographical Distribution

H3K1 is primarily detected at low frequencies in the Iberian Peninsula and the Atlantic fringe of Europe. Reported occurrences include Iberian populations (including Basques and northwest Iberia), Atlantic France, parts of the British Isles, and low frequencies in southern Italy and Sardinia. Sparse occurrences in northwest Africa (Maghreb) are consistent with prehistoric Atlantic‑fringe connections and later historical exchanges (e.g., Phoenician, Roman, medieval maritime contacts). Very occasional detections in the Near East/Anatolia reflect the broad distribution of H lineages and later mobility but are not indicative of a primary origin there.

The lineage has been observed in at least one published ancient DNA individual, supporting a Holocene antiquity and archaeological presence in at least one recovered context; however, ancient occurrences are rare in the current record.

Historical and Cultural Significance

H3K1's distribution ties it to the Atlantic/Iberian maternal genetic substratum formed during the Holocene. The haplogroup's persistence at low frequency through the Neolithic and into Bronze and Iron Age contexts suggests survival in relatively stable or partially isolated maternal lineages, which can be preserved in areas with long‑term population continuity such as parts of Iberia and the Basque region.

Although H3K1 does not mark a major demographic expansion comparable to H1 or H3 overall, its pattern is consistent with regional continuity and the patchy transmission of maternal lineages across maritime networks along the Atlantic façade. Historical events (Roman expansion, medieval mobility, trans‑Mediterranean trade) and later diaspora movements account for the scattered detections outside Iberia.

Conclusion

H3K1 is a fine‑scale, regionally concentrated mtDNA lineage reflecting the complex maternal genetic history of the Atlantic/Iberian corner of Europe during the Holocene. Its rarity and limited branching make it useful for studies of local maternal continuity, micro‑demographic events, and fine population structure when high‑resolution mitogenomes and well‑sampled population panels are available. Ongoing sampling and ancient DNA recovery will clarify its precise chronology, internal diversity, and the archaeological contexts in which it occurred.

Key Points

  • Origins and Evolution
  • Subclades
  • Geographical Distribution
  • Historical and Cultural Significance
  • Conclusion
Chapter II

Tree & Relationships

Phylogenetic context and subclades

Evolution Path

This haplogroup's evolutionary journey from its earliest ancestor to the present.

Steps Haplogroup Age Estimate Archaeology Era Time Passed Immediate Descendants Tested Modern Descendants Ancient Connections
1 H3K1 Current ~4,000 years ago 🔶 Bronze Age 4,500 years 1 4 0
2 H3K ~6,000 years ago 🪨 Chalcolithic 5,500 years 1 4 3
3 H3 ~10,000 years ago 🌾 Neolithic 10,000 years 25 340 23
4 H ~25,000 years ago 🦴 Paleolithic 25,000 years 9 6,551 991
5 HV ~30,000 years ago 🦴 Paleolithic 30,000 years 10 7,905 228
6 R ~60,000 years ago 🦴 Paleolithic 60,000 years 12 10,987 57
7 N ~60,000 years ago 🦴 Paleolithic 60,000 years 15 15,452 13
8 L3 ~70,000 years ago 🦴 Paleolithic 70,000 years 11 17,621 6
9 L ~160,000 years ago 🦴 Paleolithic 160,000 years 7 18,987 5
Chapter III

Where in the World

Geographic distribution and modern presence

Place of Origin

Iberian Peninsula / Atlantic Europe

Modern Distribution

The populations where MTDNA haplogroup H3K1 is found include:

  1. Iberian populations (Spain, Portugal, including Basques)
  2. Western Europeans (France, Atlantic France, British Isles)
  3. Southern Europeans (parts of Italy, Sardinia at lower frequencies)
  4. Northwest Africa (Maghreb, lower frequencies due to historical/prehistoric gene flow)
  5. Near East / Anatolia (very low frequencies, reflecting broader H presence and later movements)
  6. Modern populations in the Atlantic fringe and diaspora communities (variable, generally low to moderate)
CHAPTER IV

When in Time

Your haplogroup in the context of human history

~10k years ago

Neolithic Revolution

Agriculture begins, settled communities form

~5k years ago

Bronze Age

Metalworking, writing, and early civilizations

~4k years ago

Haplogroup H3K1

Your mtDNA haplogroup emerged in Iberian Peninsula / Atlantic Europe

Iberian Peninsula / Atlantic Europe
~3k years ago

Iron Age

Iron tools, expanded trade networks

~2k years ago

Classical Antiquity

Greek and Roman civilizations flourish

Present

Present Day

Modern era

Your Haplogroup
Historical Era
Chapter IV-B

Linked Cultures

Ancient cultures associated with mtDNA haplogroup H3K1

Cultural Heritage

These ancient cultures have been linked to haplogroup H3K1 based on matching ancient DNA samples from archaeological excavations. The presence of this haplogroup in these cultures provides insights into the migrations and population movements of populations carrying this haplogroup.

Bell Beaker French Neolithic Late Antique Lepenski Vir Culture Middle Neolithic French Norse-Scottish
Culture assignments are based on archaeological context of ancient DNA samples and may represent regional associations during specific time periods.
Chapter V

Sample Catalog

Top 50 ancient DNA samples directly related to haplogroup H3K1 or parent clades

50 / 50 samples
Portrait Sample Country Era Date Culture mtDNA Match
Portrait of ancient individual R111 from Italy, dated 1 CE - 200 CE
R111
Italy Imperial Rome 1 CE - 200 CE Roman Empire H Direct
Portrait of ancient individual R113 from Italy, dated 1 CE - 200 CE
R113
Italy Imperial Rome 1 CE - 200 CE Roman Empire H26a1 Direct
Portrait of ancient individual R128 from Italy, dated 1 CE - 400 CE
R128
Italy Imperial Rome 1 CE - 400 CE Roman Empire HV-b Direct
Portrait of ancient individual R1543 from Italy, dated 1 CE - 400 CE
R1543
Italy Imperial Rome 1 CE - 400 CE Roman Empire H1e Direct
Portrait of ancient individual R1545 from Italy, dated 1 CE - 400 CE
R1545
Italy Imperial Rome 1 CE - 400 CE Roman Empire H8c Direct
Portrait of ancient individual R37 from Italy, dated 1 CE - 400 CE
R37
Italy Imperial Rome 1 CE - 400 CE Roman Empire HV Direct
Portrait of ancient individual R41 from Italy, dated 1 CE - 400 CE
R41
Italy Imperial Rome 1 CE - 400 CE Roman Empire H5a1 Direct
Portrait of ancient individual R43 from Italy, dated 1 CE - 400 CE
R43
Italy Imperial Rome 1 CE - 400 CE Roman Empire H7f Direct
Portrait of ancient individual R49 from Italy, dated 1 CE - 400 CE
R49
Italy Imperial Rome 1 CE - 400 CE Roman Empire H1u Direct
Portrait of ancient individual R75 from Italy, dated 1 CE - 200 CE
R75
Italy Imperial Rome 1 CE - 200 CE Roman Empire H14a Direct
Chapter VI

Carrier Distribution Map

Geographic distribution of 100 ancient DNA samples carrying haplogroup H3K1

Time Period Filter
All Time Periods
Showing all samples
Each marker represents an ancient individual
Chapter VII

Temporal Distribution

Distribution of carriers across archaeological periods

Chapter VIII

Geographic Distribution

Distribution of carriers by country of origin

Chapter IX

Country × Era Distribution

Cross-tabulation of carrier countries and archaeological periods

Data

Data & Provenance

Source information and data quality

Last Updated 2026-02-16
Confidence Score 50/100
Coverage Low
Data Source

We use the latest phylotree for MTDNA haplogroup classification and data.