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mtDNA Haplogroup • Maternal Lineage

N1A1A

mtDNA Haplogroup N1A1A

~9,000 years ago
Near East / Anatolia
2 subclades
64 ancient samples
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Chapter I

The Story

The journey of mtDNA haplogroup N1A1A

Origins and Evolution

mtDNA haplogroup N1A1A is a downstream branch of N1A1, itself a derivative of the broader N1A lineage. Based on the phylogenetic position of N1A1A below N1A1 and the known age of N1A1 (~11 kya in Near East/Anatolia), N1A1A most plausibly arose in the Near East or Anatolia in the early Holocene (roughly ~9 kya). Its emergence likely coincided with the demographic processes associated with the spread of food production and the early Neolithic transition, when regional population growth and mobility created opportunities for local mitochondrial lineages to diversify and spread.

Subclades (if applicable)

Downstream variation within N1A1A has been observed in both ancient and modern mtDNA datasets, though the subclade structure is less deeply sampled than for some more common lineages. Ancient DNA studies that recover N1A1-derived lineages sometimes resolve finer branches of N1A1A in early Neolithic assemblages; modern population sampling has identified rare, geographically scattered derivatives. Because sampling remains limited, researchers treat many downstream branches as moderately defined and subject to refinement as more complete mitogenomes are published.

Geographical Distribution

N1A1A shows a distribution pattern characteristic of a Near Eastern/Anatolian origin with diffusion into adjoining regions during the Neolithic expansion. Highest frequencies and diversity are observed historically in Anatolia and adjacent Near Eastern regions, while occurrences in Europe (both ancient and modern) are typically low-frequency but important for tracing Neolithic farmer ancestry. The haplogroup also appears sporadically in North Africa and the Horn of Africa, consistent with historical and prehistoric gene flow between the Near East and Africa. In modern populations N1A1A is uncommon and patchily distributed, often seen at low frequencies in southern Europe and coastal North Africa and represented by isolated lineages in parts of the Caucasus and Iran.

Historical and Cultural Significance

N1A1A is notable in population genetics because of its association with early agricultural communities. It (and closely related N1A1 sublineages) has been recovered from ancient Anatolian and early European Neolithic contexts — including Cardial and Linearbandkeramik (LBK)-associated assemblages — making it a useful marker for studying the maternal component of the Neolithic migration into Europe. The presence of N1A1A in ancient farmer genomes underlines the Near Eastern contribution to European Neolithic ancestry. Its later low frequency in many modern populations reflects both the initial Neolithic dispersal and substantial subsequent demographic events (population replacement, drift, and admixture) that reshaped maternal-lineage frequencies across Eurasia.

Conclusion

As a relatively rare but historically informative lineage, N1A1A functions as a molecular signature of early Near Eastern/Anatolian maternal ancestry that participated in the Neolithic spread of farming into Europe. Continued mitogenome sequencing of both modern and ancient samples will refine its internal branching, geographic patchiness, and the timing of its dispersals, but current evidence places its origin in the early Holocene Near East with notable representation among early farmers in archaeological contexts.

Key Points

  • Origins and Evolution
  • Subclades (if applicable)
  • Geographical Distribution
  • Historical and Cultural Significance
  • Conclusion
Chapter II

Tree & Relationships

Phylogenetic context and subclades

Evolution Path

This haplogroup's evolutionary journey from its earliest ancestor to the present.

Steps Haplogroup Age Estimate Archaeology Era Time Passed Immediate Descendants Tested Modern Descendants Ancient Connections
1 N1A1A Current ~9,000 years ago 🌾 Neolithic 9,000 years 2 48 64
2 N1A1 ~11,000 years ago 🌾 Neolithic 11,000 years 2 80 0
3 N1A ~13,000 years ago 🏹 Mesolithic 13,000 years 3 100 6
4 N1 ~55,000 years ago 🦴 Paleolithic 55,000 years 2 276 21
5 N ~60,000 years ago 🦴 Paleolithic 60,000 years 15 15,452 13
6 L3 ~70,000 years ago 🦴 Paleolithic 70,000 years 11 17,621 6
7 L ~160,000 years ago 🦴 Paleolithic 160,000 years 7 18,987 5

Siblings (1)

Other branches from the same parent haplogroup

Chapter III

Where in the World

Geographic distribution and modern presence

Place of Origin

Near East / Anatolia

Modern Distribution

The populations where mtDNA haplogroup N1A1A is found include:

  1. Anatolian and Levantine Near Eastern populations
  2. Ancient Anatolian Neolithic assemblages
  3. Early European Neolithic farmers (e.g., LBK, Cardial-related groups)
  4. Modern Southern European populations (Italy, Greece, Iberian fringe) at low frequencies
  5. Central and Northern European populations in ancient contexts (now rare)
  6. North African coastal populations and the Maghreb at low frequencies
  7. Horn of Africa populations (Ethiopia, Somalia) in specific sublineages
  8. Caucasus and Iranian populations (moderate to low frequencies)
  9. Sporadic occurrences in parts of Central Asia and steppe-adjacent groups
  10. Ancient Cardial/Cardial-related and other early farmer assemblages in Europe
CHAPTER IV

When in Time

Your haplogroup in the context of human history

~10k years ago

Neolithic Revolution

Agriculture begins, settled communities form

~9k years ago

Haplogroup N1A1A

Your mtDNA haplogroup emerged in Near East / Anatolia

Near East / Anatolia
~5k years ago

Bronze Age

Metalworking, writing, and early civilizations

~3k years ago

Iron Age

Iron tools, expanded trade networks

~2k years ago

Classical Antiquity

Greek and Roman civilizations flourish

Present

Present Day

Modern era

Your Haplogroup
Historical Era
Chapter IV-B

Linked Cultures

Ancient cultures associated with mtDNA haplogroup N1A1A

Cultural Heritage

These ancient cultures have been linked to haplogroup N1A1A based on matching ancient DNA samples from archaeological excavations. The presence of this haplogroup in these cultures provides insights into the migrations and population movements of populations carrying this haplogroup.

Alföld Linear Pottery Anatolian Neolithic Armenian LBA-EIA Baalberge Culture Baja PPNB Czech Neolithic Early Bronze Age Russian Linear Pottery Culture Starčevo Culture
Culture assignments are based on archaeological context of ancient DNA samples and may represent regional associations during specific time periods.
Chapter V

Sample Catalog

Top 50 ancient DNA samples directly related to haplogroup N1A1A or parent clades

50 / 50 samples
Portrait Sample Country Era Date Culture mtDNA Match
Portrait of ancient individual CLR31 from France, dated 400 BCE - 300 BCE
CLR31
France Iron Age Culture of Aude 400 BCE - 300 BCE Aude N1a1a1 Direct
Portrait of ancient individual I18536 from Sudan, dated 650 CE - 1050 CE
I18536
Sudan Early Christian Era in Sudan 650 CE - 1050 CE Nubian Christian N1a1a3 Direct
Portrait of ancient individual I18524 from Sudan, dated 650 CE - 1050 CE
I18524
Sudan Early Christian Era in Sudan 650 CE - 1050 CE Nubian Christian N1a1a3 Direct
Portrait of ancient individual SZRV-212 from Hungary, dated 700 CE - 800 CE
SZRV-212
Hungary Late Avar Period Hungary 700 CE - 800 CE Avar Culture N1a1a1 Direct
Portrait of ancient individual SZRV-67 from Hungary, dated 700 CE - 800 CE
SZRV-67
Hungary Late Avar Period Hungary 700 CE - 800 CE Avar Culture N1a1a1 Direct
Portrait of ancient individual VK232 from Sweden, dated 900 CE - 1050 CE
VK232
Sweden Viking Age Sweden 900 CE - 1050 CE Viking N1a1a1 Direct
Portrait of ancient individual VK232 from Sweden, dated 900 CE - 1050 CE
VK232
Sweden The Viking Age 900 CE - 1050 CE N1a1a1 Direct
Portrait of ancient individual I19328 from Armenia, dated 904 BCE - 814 BCE
I19328
Armenia Late Bronze Age to Early Iron Age Armenia 904 BCE - 814 BCE Armenian LBA-EIA N1a1a+152 Direct
Portrait of ancient individual I18470 from Armenia, dated 1150 BCE - 1050 BCE
I18470
Armenia Late Bronze Age to Early Iron Age Armenia 1150 BCE - 1050 BCE Armenian LBA-EIA N1a1a+152 Direct
Portrait of ancient individual NEO806 from Italy, dated 1386 BCE - 1129 BCE
NEO806
Italy Bronze Age Italy 1386 BCE - 1129 BCE Italian Bronze Age N1a1a1 Direct
Chapter VI

Carrier Distribution Map

Geographic distribution of 64 ancient DNA samples carrying haplogroup N1A1A

Time Period Filter
All Time Periods
Showing all samples
Each marker represents an ancient individual
Chapter VII

Temporal Distribution

Distribution of carriers across archaeological periods

Chapter VIII

Geographic Distribution

Distribution of carriers by country of origin

Chapter IX

Country × Era Distribution

Cross-tabulation of carrier countries and archaeological periods

Data

Data & Provenance

Source information and data quality

Last Updated 2026-02-16
Confidence Score 50/100
Coverage Low
Data Source

We use the latest phylotree for MTDNA haplogroup classification and data.