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mtDNA Haplogroup • Maternal Lineage

D4B1A

mtDNA Haplogroup D4B1A

~9,000 years ago
East / Northeast Asia
2 subclades
13 ancient samples
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Chapter I

The Story

The journey of mtDNA haplogroup D4B1A

Origins and Evolution

Haplogroup D4B1A is a subclade of mtDNA haplogroup D4B1, itself nested within the broader D4 branch, a major East Eurasian maternal lineage. Based on its phylogenetic position and the estimated age of its parent clade (D4B1 ~12 kya), D4B1A most likely coalesced in the early Holocene (roughly ~9 kya, by phylogenetic inference). The lineage reflects post-glacial population structure and local diversification along the North Pacific margin after the Last Glacial Maximum, consistent with patterns seen in other D4 subclades that expanded with Holocene hunter-gatherer and early coastal communities.

Subclades (if applicable)

D4B1A may contain downstream branches observed at low frequencies in modern populations; however, fine-scale subclade resolution for D4B1A in the published literature and public databases is still limited compared with some other D4 lineages. Where high-resolution full mitogenome data exist, D4B1A can be split into additional sublineages defined by private mutations, useful for tracing regional micro-differentiation (for example, candidate local subbranches in the Japanese archipelago and Russian Far East). Continued mitogenome sequencing of modern and ancient samples will clarify the internal structure of D4B1A.

Geographical Distribution

D4B1A is concentrated on the North Pacific margin, with highest frequencies and diversity in: Japan (including lineages associated with the Jomon/Ainu genetic substratum), the Korean Peninsula, northeastern China, and parts of the Russian Far East and Siberia. The haplogroup also occurs at lower frequencies in some Mongolic and Turkic-speaking groups of northern and central Asia and is occasionally detected in coastal Southeast Asian island populations—likely reflecting historical gene flow and maritime contacts. The geographic pattern is consistent with an origin in Northeast/East Asia followed by localized expansions and long-term continuity in coastal and riverine hunter-gatherer communities.

Historical and Cultural Significance

D4B1A contributes to genetic signals of continuity between Late Pleistocene/early Holocene populations and later Holocene communities along the North Pacific rim. It has been observed in modern groups linked to Jomon/Ainu heritage and in indigenous Siberian peoples (for example, Evenk and related groups), supporting the view that several D4 sublineages persisted regionally rather than being fully replaced by later agricultural expansions. In archaeological terms, D4B1A aligns with the genetics of mobile coastal and interior hunter-gatherers of the early Holocene and may appear in contexts assigned to Jomon, Okhotsk, and related cultural horizons in northeast Asia.

Conclusion

D4B1A is a regionally important East/Northeast Asian maternal lineage that originated in the early Holocene and is most informative for studies of postglacial population continuity and localized demographic events along the North Pacific margin. While not one of the highest-frequency pan-East Asian haplogroups, its phylogeographic distribution and presence in ancient and modern samples make it a useful marker for reconstructing maternal ancestries in Japan, Korea, northeastern China, and parts of Siberia. Increased mitogenome sampling—particularly from archaeological remains—will improve the resolution of D4B1A's internal branching and historical movements.

Key Points

  • Origins and Evolution
  • Subclades (if applicable)
  • Geographical Distribution
  • Historical and Cultural Significance
  • Conclusion
Chapter II

Tree & Relationships

Phylogenetic context and subclades

Evolution Path

This haplogroup's evolutionary journey from its earliest ancestor to the present.

Steps Haplogroup Age Estimate Archaeology Era Time Passed Immediate Descendants Tested Modern Descendants Ancient Connections
1 D4B1A Current ~9,000 years ago 🌾 Neolithic 9,000 years 2 4 13
2 D4B1 ~12,000 years ago 🌾 Neolithic 12,000 years 2 5 0
3 D4B ~15,000 years ago 🏹 Mesolithic 15,000 years 2 27 12
4 D4 ~25,000 years ago 🦴 Paleolithic 25,000 years 12 276 19
5 D ~45,000 years ago 🦴 Paleolithic 45,000 years 7 398 137
6 M ~60,000 years ago 🦴 Paleolithic 60,000 years 11 1,200 41
7 L3 ~70,000 years ago 🦴 Paleolithic 70,000 years 11 17,621 6
8 L ~160,000 years ago 🦴 Paleolithic 160,000 years 7 18,987 5

Siblings (1)

Other branches from the same parent haplogroup

Chapter III

Where in the World

Geographic distribution and modern presence

Place of Origin

East / Northeast Asia

Modern Distribution

The populations where MTDNA haplogroup D4B1A is found include:

  1. East Asian populations (Han Chinese, Japanese, Korean)
  2. Indigenous Siberian groups (e.g., Yakut, Evenk, Nganasan, Chukchi and other Russian Far East peoples)
  3. Ainu and other Jomon-descended or Jomon-influenced groups in the Japanese archipelago
  4. Mongolic and some Turkic-speaking Central Asian populations at low frequencies
  5. Select Southeast Asian coastal/island populations at low frequencies
  6. Scattered occurrences in northern Mongolia and communities affected by historical Northeast Asian admixture
CHAPTER IV

When in Time

Your haplogroup in the context of human history

~10k years ago

Neolithic Revolution

Agriculture begins, settled communities form

~9k years ago

Haplogroup D4B1A

Your mtDNA haplogroup emerged in East / Northeast Asia

East / Northeast Asia
~5k years ago

Bronze Age

Metalworking, writing, and early civilizations

~3k years ago

Iron Age

Iron tools, expanded trade networks

~2k years ago

Classical Antiquity

Greek and Roman civilizations flourish

Present

Present Day

Modern era

Your Haplogroup
Historical Era
Chapter IV-B

Linked Cultures

Ancient cultures associated with mtDNA haplogroup D4B1A

Cultural Heritage

These ancient cultures have been linked to haplogroup D4B1A based on matching ancient DNA samples from archaeological excavations. The presence of this haplogroup in these cultures provides insights into the migrations and population movements of populations carrying this haplogroup.

Agin-Buryat Culture Center West 5 Sukhbaatar Multi-Period Ulgii Culture Ust-Belaya Culture Yellow River Culture
Culture assignments are based on archaeological context of ancient DNA samples and may represent regional associations during specific time periods.
Chapter V

Sample Catalog

Top 13 ancient DNA samples directly related to haplogroup D4B1A or parent clades

13 / 13 samples
Portrait Sample Country Era Date Culture mtDNA Match
Portrait of ancient individual RKF229 from Hungary, dated 580 CE - 720 CE
RKF229
Hungary Early Middle Avar Period 580 CE - 720 CE Avar D4b1a2 Direct
Portrait of ancient individual ULZ001 from Mongolia, dated 1044 BCE - 917 BCE
ULZ001
Mongolia Late Bronze Age Center West 5, Mongolia 1044 BCE - 917 BCE Center West 5 D4b1a2 Direct
Portrait of ancient individual ULN007 from Mongolia, dated 1650 BCE - 1350 CE
ULN007
Mongolia Middle to Late Bronze Age to Xiongnu to Late Medieval Sukhbaatar, Mongolia 1650 BCE - 1350 CE Sukhbaatar Multi-Period D4b1a2 Direct
Portrait of ancient individual PLTM312 from China, dated 2137 BCE - 1936 BCE
PLTM312
China Late Neolithic Yellow River, China 2137 BCE - 1936 BCE Yellow River Culture D4b1a Direct
Portrait of ancient individual PLTM312 from China, dated 2137 BCE - 1936 BCE
PLTM312
China Late Neolithic China 2137 BCE - 1936 BCE D4b1a Direct
Portrait of ancient individual PLTM311 from China, dated 2201 BCE - 1984 BCE
PLTM311
China Late Neolithic Yellow River, China 2201 BCE - 1984 BCE Yellow River Culture D4b1a4 Direct
Portrait of ancient individual PLTM311 from China, dated 2201 BCE - 1984 BCE
PLTM311
China Late Neolithic China 2201 BCE - 1984 BCE D4b1a4 Direct
Portrait of ancient individual PLTM310 from China, dated 2277 BCE - 2035 BCE
PLTM310
China Late Neolithic Yellow River, China 2277 BCE - 2035 BCE Yellow River Culture D4b1a Direct
Portrait of ancient individual PLTM310 from China, dated 2277 BCE - 2035 BCE
PLTM310
China Late Neolithic China 2277 BCE - 2035 BCE D4b1a Direct
Portrait of ancient individual brn012 from Russia, dated 4320 BCE - 4052 BCE
brn012
Russia Neolithic Agin-Buryat, Russia 4320 BCE - 4052 BCE Agin-Buryat Culture D4b1a2 Direct
Chapter VI

Carrier Distribution Map

Geographic distribution of 13 ancient DNA samples carrying haplogroup D4B1A

Time Period Filter
All Time Periods
Showing all samples
Each marker represents an ancient individual
Chapter VII

Temporal Distribution

Distribution of carriers across archaeological periods

Chapter VIII

Geographic Distribution

Distribution of carriers by country of origin

Chapter IX

Country × Era Distribution

Cross-tabulation of carrier countries and archaeological periods

Data

Data & Provenance

Source information and data quality

Last Updated 2026-02-16
Confidence Score 50/100
Coverage Low
Data Source

We use the latest phylotree for MTDNA haplogroup classification and data.