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mtDNA Haplogroup • Maternal Lineage

G3A1

mtDNA Haplogroup G3A1

~7,000 years ago
Northeast/East Asia
0 subclades
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Chapter I

The Story

The journey of mtDNA haplogroup G3A1

Origins and Evolution

mtDNA haplogroup G3A1 is a descendant lineage of G3A (itself a branch of haplogroup G) and likely arose in Northeast/East Asia during the early to mid-Holocene. Its time depth is younger than the parent G3A (estimated ~9 kya) and the emergence of G3A1 at roughly ~7 kya is consistent with regional demographic continuity after the Last Glacial Maximum and with localized maternal expansions in East and Northeast Asia. G3A1 represents one of several G-derived mtDNA lineages that persisted in hunter-gatherer and early Holocene populations across the Russian Far East, Mongolia, and the Japanese archipelago.

Subclades

As a defined terminal subclade of G3A, G3A1 may contain further geographically restricted sublineages detectable only with dense sampling and full mitogenome sequencing. Published and database samples so far indicate limited internal diversity relative to broader G lineages; this pattern is consistent with a regional founder effect and subsequent drift in relatively small, dispersed hunter-gatherer and coastal populations. Ongoing mitogenome studies continue to refine internal branching and identify geographically specific subbranches.

Geographical Distribution

G3A1 is concentrated in Northeast/East Asia and adjacent Siberia. Modern occurrences are most frequent in: northeastern China and Korea, the Russian Far East and Siberian populations (e.g., Yakut, Evenk, Koryak), parts of Mongolia and Buryatia, and Japan—including rare instances among Ainu and some Ryukyuan/Kansai-region samples. Low-frequency, geographically localized occurrences have been reported in some circumpolar groups and in very rare instances in the Americas, reflecting probable late-Pleistocene/Holocene trans-Beringian connections or later small-scale gene flow.

Ancient DNA: G3A1 has been detected in at least two archaeological samples in public databases, supporting continuity of this maternal lineage in the region through the Holocene and giving direct temporal anchoring for its presence in archaeological contexts.

Historical and Cultural Significance

G3A1 is best interpreted as part of the hunter-gatherer-derived maternal substrate of Northeast Asia. Its presence in Japan and among indigenous Siberian groups associates it with coastal and inland forager populations such as the Jomon-related communities in prehistoric Japan and various Neolithic and later hunter-fisher groups of the Russian Far East and sub-arctic Eurasia. Where present among historic-era groups (for example, Ainu and Okhotsk-related populations), G3A1 helps trace maternal continuity and localized demographic events (founder effects, drift, and small-scale migrations) rather than large, continent-wide replacement.

Conclusion

G3A1 is a geographically informative, regionally concentrated mtDNA lineage that documents Holocene maternal continuity in Northeast/East Asia and adjacent Siberia. Its relatively low overall frequency and patchy distribution are consistent with the demographic history of small, often isolated coastal and inland forager groups, with occasional extensions into nearby farming or pastoral populations via contact. Increased mitogenome sampling, especially from under-represented Siberian and ancient contexts, will sharpen estimates of its age, internal structure, and migration history.

Key Points

  • Origins and Evolution
  • Subclades
  • Geographical Distribution
  • Historical and Cultural Significance
  • Conclusion
Chapter II

Tree & Relationships

Phylogenetic context and subclades

Evolution Path

This haplogroup's evolutionary journey from its earliest ancestor to the present.

Steps Haplogroup Age Estimate Archaeology Era Time Passed Immediate Descendants Tested Modern Descendants Ancient Connections
1 G3A1 Current ~7,000 years ago 🌾 Neolithic 7,000 years 0 0 0
2 G3A ~9,000 years ago 🌾 Neolithic 9,000 years 3 3 11
3 G3 ~12,000 years ago 🌾 Neolithic 12,000 years 2 5 1
4 G ~35,000 years ago 🦴 Paleolithic 35,000 years 4 300 3
5 M ~60,000 years ago 🦴 Paleolithic 60,000 years 11 1,200 41
6 L3 ~70,000 years ago 🦴 Paleolithic 70,000 years 11 17,621 6
7 L ~160,000 years ago 🦴 Paleolithic 160,000 years 7 18,987 5

Subclades (0)

Terminal branch - no known subclades

Siblings (2)

Other branches from the same parent haplogroup

Chapter III

Where in the World

Geographic distribution and modern presence

Place of Origin

Northeast/East Asia

Modern Distribution

The populations where mtDNA haplogroup G3A1 is found include:

  1. Japanese populations (including Ainu and some Ryukyuan groups)
  2. Koreans and northeastern Han Chinese
  3. Indigenous Siberian groups (e.g., Yakut, Evenk, Nganasan, Koryak)
  4. Mongolic and some Central Asian populations (e.g., Buryat, Mongol)
  5. Northern Tibeto-Burman and other highland East Asian groups (at low to moderate frequencies)
  6. Circumpolar communities and rare occurrences in the Americas (generally low frequency and localized)
CHAPTER IV

When in Time

Your haplogroup in the context of human history

~10k years ago

Neolithic Revolution

Agriculture begins, settled communities form

~7k years ago

Haplogroup G3A1

Your mtDNA haplogroup emerged in Northeast/East Asia

Northeast/East Asia
~5k years ago

Bronze Age

Metalworking, writing, and early civilizations

~3k years ago

Iron Age

Iron tools, expanded trade networks

~2k years ago

Classical Antiquity

Greek and Roman civilizations flourish

Present

Present Day

Modern era

Your Haplogroup
Historical Era
Chapter IV-B

Linked Cultures

Ancient cultures associated with mtDNA haplogroup G3A1

Cultural Heritage

These ancient cultures have been linked to haplogroup G3A1 based on matching ancient DNA samples from archaeological excavations. The presence of this haplogroup in these cultures provides insights into the migrations and population movements of populations carrying this haplogroup.

Avar Culture Brailita Chinese Paleolithic Dulan-Wayan Early Medieval Mongolian Khovsgol Culture Umungobi Medieval Upper Yellow River Culture Wuzan Culture Xinjiang Culture Xiongnu Culture
Culture assignments are based on archaeological context of ancient DNA samples and may represent regional associations during specific time periods.
Chapter V

Sample Catalog

Top 50 ancient DNA samples directly related to haplogroup G3A1 or parent clades

50 / 50 samples
Portrait Sample Country Era Date Culture mtDNA Match
Portrait of ancient individual BUR004 from Mongolia, dated 40 BCE - 109 CE
BUR004
Mongolia Early Medieval Xiongnu 40 BCE - 109 CE Xiongnu G2a5 Direct
Portrait of ancient individual DCZ-M21II from China, dated 120 CE - 248 CE
DCZ-M21II
China Iron Age Upper Yellow River, China 120 CE - 248 CE Upper Yellow River Culture G2b1b Direct
Portrait of ancient individual DCZ-M21II from China, dated 120 CE - 248 CE
DCZ-M21II
China Han Dynasty China 120 CE - 248 CE G2b1b Direct
Portrait of ancient individual SKT006 from Mongolia, dated 162 BCE - 47 BCE
SKT006
Mongolia Xiongnu to Late Medieval Khuvsgul, Mongolia 162 BCE - 47 BCE Khuvsgul Transition G2a1e Direct
Portrait of ancient individual IMA004 from Russia, dated 200 BCE - 100 CE
IMA004
Russia Xiongnu Period Buryatia, Russia 200 BCE - 100 CE Xiongnu Buryat G2a-a Direct
Portrait of ancient individual TAK001 from Mongolia, dated 200 BCE - 100 CE
TAK001
Mongolia Xiongnu Period Khovd, Mongolia 200 BCE - 100 CE Xiongnu Khovd G2a1 Direct
Portrait of ancient individual UVG001 from Mongolia, dated 200 BCE - 100 CE
UVG001
Mongolia Xiongnu Period Bulgan, Mongolia 200 BCE - 100 CE Xiongnu G2a2 Direct
Portrait of ancient individual YPN018 from Thailand, dated 200 CE - 450 CE
YPN018
Thailand Yappa Nhae Log Coffin Culture Iron Age 200 CE - 450 CE Yappa Nhae G2b1a Direct
Portrait of ancient individual YPN023 from Thailand, dated 200 CE - 450 CE
YPN023
Thailand Yappa Nhae Log Coffin Culture Iron Age 200 CE - 450 CE Yappa Nhae G2b1a Direct
Portrait of ancient individual DA73 from Kyrgyzstan, dated 236 CE - 421 CE
DA73
Kyrgyzstan The Hun Period in Kyrgyzstan 236 CE - 421 CE Hunnic Period G2a1 Direct
Chapter VI

Carrier Distribution Map

Geographic distribution of 100 ancient DNA samples carrying haplogroup G3A1

Time Period Filter
All Time Periods
Showing all samples
Each marker represents an ancient individual
Chapter VII

Temporal Distribution

Distribution of carriers across archaeological periods

Chapter VIII

Geographic Distribution

Distribution of carriers by country of origin

Chapter IX

Country × Era Distribution

Cross-tabulation of carrier countries and archaeological periods

Data

Data & Provenance

Source information and data quality

Last Updated 2026-02-16
Confidence Score 50/100
Coverage Low
Data Source

We use the latest phylotree for MTDNA haplogroup classification and data.