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mtDNA Haplogroup • Maternal Lineage

H13C1

mtDNA Haplogroup H13C1

~6,000 years ago
Near East / Caucasus
1 subclades
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Chapter I

The Story

The journey of mtDNA haplogroup H13C1

Origins and Evolution

mtDNA haplogroup H13C1 is a downstream branch of H13C and therefore nested within the broader H13 clade of haplogroup H. H13 is considered part of the post‑glacial and early Holocene maternal diversification that took place in the Near East and Caucasus and subsequently contributed to Neolithic and later movements into Anatolia and parts of Europe. H13C likely emerged around the early to mid-Holocene (parent node ~9 kya), and H13C1 represents a younger diversification of that line, plausibly in the mid-Holocene (on the order of ~6–7 kya) consistent with localized maternal expansions and founder events in the Caucasus and nearby regions.

Genetically, H13C1 carries derived mutations that define it relative to H13C, and its phylogeographic pattern shows localized concentration with scattered downstream branches that appear in neighboring regions. As with many regional mtDNA subclades, its present distribution reflects a mix of Paleolithic/post‑glacial legacy, Neolithic farmer movements, and later Bronze Age and historic-era migrations.

Subclades (if applicable)

H13C1 may include minor internal branches identifiable in high-resolution complete mitochondrial genomes; these descendant lineages tend to be rare and geographically restricted. Where complete-mitogenome surveys exist, investigators can sometimes resolve multiple H13C1 sublineages that correlate with local population structure in the Caucasus or specific founder events in Anatolia and the Levant. However, H13C1 is not among the most deeply diversified or widely spread H subclades, so subclade diversity is moderate and often detectable only with whole-mtDNA sequencing.

Geographical Distribution

The highest frequencies and diversity of H13C1 are found in the Caucasus (Armenians, Georgians, Azeris) and adjacent parts of northeastern Anatolia and northwestern Iran, consistent with a Near Eastern/Caucasian origin. From that core area, lower-frequency occurrences appear in Anatolia more broadly, the Levant, and into Southern Europe (Italy, Greece, the Balkans) — often at low to sporadic frequencies. Instances of H13C1 have also been recorded in some Jewish maternal lineages (both Ashkenazi and Sephardic contexts) and infrequently in Central and Eastern European samples, reflecting historical contacts, trade, and migration.

Ancient DNA studies occasionally recover H13 and H13C-lineage mtDNAs in archaeological contexts tied to Neolithic and post‑Neolithic societies of Anatolia, the Caucasus and adjacent regions, supporting a model in which H13-derived lineages contributed maternal ancestry during the spread of farming and in later Bronze Age movements.

Historical and Cultural Significance

While H13C1 itself is not associated with any single pan‑continental migration, its phylogeography points to involvement in regional demographic processes: the late-glacial/early-Holocene recolonization of the Near East/Caucasus, incorporation into Neolithic farmer groups moving into Anatolia and Europe, and local Bronze Age cultural expansions (e.g., movements from the Caucasus that contributed to the genetic landscape of nearby regions). Archaeological cultures that overlap the geographic range and timeframe of H13C1 include Neolithic Anatolian farmer groups and Bronze Age Caucasus complexes such as Kura-Araxes; in genetic studies these cultures often show a mosaic of local hunter-gatherer and Near Eastern farmer maternal lineages.

Modern occurrences of H13C1 in Jewish maternal lineages and in scattered European populations reflect historical mobility (diaspora, trade, and smaller-scale migrations) rather than large-scale, continent‑wide expansions.

Conclusion

H13C1 is a regionally informative maternal lineage that helps trace maternal ancestry centered on the Caucasus and adjoining Near Eastern landscapes. Its presence at low frequencies beyond that core region documents pathways of gene flow from the Near East into Anatolia, the Levant and parts of Europe during the Neolithic and subsequent eras, and it remains a useful marker in population‑level and ancient DNA studies for reconstructing localized maternal histories.

Key Points

  • Origins and Evolution
  • Subclades (if applicable)
  • Geographical Distribution
  • Historical and Cultural Significance
  • Conclusion
Chapter II

Tree & Relationships

Phylogenetic context and subclades

Evolution Path

This haplogroup's evolutionary journey from its earliest ancestor to the present.

Steps Haplogroup Age Estimate Archaeology Era Time Passed Immediate Descendants Tested Modern Descendants Ancient Connections
1 H13C1 Current ~6,000 years ago 🪨 Chalcolithic 6,500 years 1 13 0
2 H13C ~9,000 years ago 🌾 Neolithic 9,000 years 1 14 3
3 H13 ~12,000 years ago 🌾 Neolithic 12,000 years 3 181 0
4 H1 ~15,000 years ago 🏹 Mesolithic 15,000 years 28 2,656 74
5 H ~25,000 years ago 🦴 Paleolithic 25,000 years 9 6,551 991
6 HV ~30,000 years ago 🦴 Paleolithic 30,000 years 10 7,905 228
7 R ~60,000 years ago 🦴 Paleolithic 60,000 years 12 10,987 57
8 N ~60,000 years ago 🦴 Paleolithic 60,000 years 15 15,452 13
9 L3 ~70,000 years ago 🦴 Paleolithic 70,000 years 11 17,621 6
10 L ~160,000 years ago 🦴 Paleolithic 160,000 years 7 18,987 5
Chapter III

Where in the World

Geographic distribution and modern presence

Place of Origin

Near East / Caucasus

Modern Distribution

The populations where MTDNA haplogroup H13C1 is found include:

  1. Caucasus populations (Armenians, Georgians, Azeris)
  2. Anatolian/Turkish populations (especially northeastern Anatolia)
  3. Northwestern Iran and adjacent Near Eastern groups
  4. Levantine populations (Lebanon, Syria) at low to moderate frequencies
  5. Balkan populations and Southern Europe (Italy, Greece) at low to moderate frequencies
  6. Ashkenazi and some Sephardic Jewish maternal lineages (sporadic)
  7. Central and Eastern European populations at low frequencies
  8. Western European populations sporadically and in ancient contexts
CHAPTER IV

When in Time

Your haplogroup in the context of human history

~10k years ago

Neolithic Revolution

Agriculture begins, settled communities form

~6k years ago

Haplogroup H13C1

Your mtDNA haplogroup emerged in Near East / Caucasus

Near East / Caucasus
~5k years ago

Bronze Age

Metalworking, writing, and early civilizations

~3k years ago

Iron Age

Iron tools, expanded trade networks

~2k years ago

Classical Antiquity

Greek and Roman civilizations flourish

Present

Present Day

Modern era

Your Haplogroup
Historical Era
Chapter IV-B

Linked Cultures

Ancient cultures associated with mtDNA haplogroup H13C1

Cultural Heritage

These ancient cultures have been linked to haplogroup H13C1 based on matching ancient DNA samples from archaeological excavations. The presence of this haplogroup in these cultures provides insights into the migrations and population movements of populations carrying this haplogroup.

Boğazköy-Hattuša Cardial Culture French Neolithic Iron Gates Culture Kotias Culture Kotias Klde Culture Niemcza Culture
Culture assignments are based on archaeological context of ancient DNA samples and may represent regional associations during specific time periods.
Chapter V

Sample Catalog

Top 50 ancient DNA samples directly related to haplogroup H13C1 or parent clades

50 / 50 samples
Portrait Sample Country Era Date Culture mtDNA Match
Portrait of ancient individual R111 from Italy, dated 1 CE - 200 CE
R111
Italy Imperial Rome 1 CE - 200 CE Roman Empire H Direct
Portrait of ancient individual R113 from Italy, dated 1 CE - 200 CE
R113
Italy Imperial Rome 1 CE - 200 CE Roman Empire H26a1 Direct
Portrait of ancient individual R128 from Italy, dated 1 CE - 400 CE
R128
Italy Imperial Rome 1 CE - 400 CE Roman Empire HV-b Direct
Portrait of ancient individual R1543 from Italy, dated 1 CE - 400 CE
R1543
Italy Imperial Rome 1 CE - 400 CE Roman Empire H1e Direct
Portrait of ancient individual R1545 from Italy, dated 1 CE - 400 CE
R1545
Italy Imperial Rome 1 CE - 400 CE Roman Empire H8c Direct
Portrait of ancient individual R37 from Italy, dated 1 CE - 400 CE
R37
Italy Imperial Rome 1 CE - 400 CE Roman Empire HV Direct
Portrait of ancient individual R41 from Italy, dated 1 CE - 400 CE
R41
Italy Imperial Rome 1 CE - 400 CE Roman Empire H5a1 Direct
Portrait of ancient individual R43 from Italy, dated 1 CE - 400 CE
R43
Italy Imperial Rome 1 CE - 400 CE Roman Empire H7f Direct
Portrait of ancient individual R49 from Italy, dated 1 CE - 400 CE
R49
Italy Imperial Rome 1 CE - 400 CE Roman Empire H1u Direct
Portrait of ancient individual R75 from Italy, dated 1 CE - 200 CE
R75
Italy Imperial Rome 1 CE - 200 CE Roman Empire H14a Direct
Chapter VI

Carrier Distribution Map

Geographic distribution of 100 ancient DNA samples carrying haplogroup H13C1

Time Period Filter
All Time Periods
Showing all samples
Each marker represents an ancient individual
Chapter VII

Temporal Distribution

Distribution of carriers across archaeological periods

Chapter VIII

Geographic Distribution

Distribution of carriers by country of origin

Chapter IX

Country × Era Distribution

Cross-tabulation of carrier countries and archaeological periods

Data

Data & Provenance

Source information and data quality

Last Updated 2026-02-16
Confidence Score 50/100
Coverage Low
Data Source

We use the latest phylotree for MTDNA haplogroup classification and data.