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mtDNA Haplogroup • Maternal Lineage

H13A2

mtDNA Haplogroup H13A2

~8,000 years ago
Near East / Caucasus
3 subclades
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Chapter I

The Story

The journey of mtDNA haplogroup H13A2

Origins and Evolution

mtDNA haplogroup H13A2 is a downstream branch of H13A, itself a subclade of H13 within haplogroup H. Based on the phylogenetic position of H13A2 beneath H13A and on coalescence estimates for nearby lineages, H13A2 most likely formed in the early to mid‑Holocene (approximately 6–9 kya, here estimated ~7.5 kya) in the Near East / Caucasus region. The parent clade H13A has been associated with post‑glacial re‑expansion and early Neolithic movements from the Near East and Caucasus into Anatolia and southeastern Europe; H13A2 represents one lineage that diversified within that broader demographic context.

Subclades (if applicable)

H13A2 sits beneath H13A in the mtDNA tree. Depending on the resolution of available sequencing data, H13A2 may contain further downstream sublineages defined by additional private mutations observed in modern and ancient mitogenomes. Because H13A2 is a relatively specific branch, its internal diversity is lower than older haplogroups; targeted mitogenome sequencing of individuals assigned to H13A2 often reveals regionally informative private variants that can help track micro‑scale maternal movements across the Caucasus, Anatolia and nearby regions.

Geographical Distribution

The modern and ancient distribution of H13A2 mirrors the Near Eastern/Caucasus concentrations seen for the broader H13A clade but with a stronger regional focus. Highest frequencies are recorded in the Caucasus and adjacent parts of Western Asia (Anatolia, NW Iran), while lower, sporadic occurrences appear across the Levant, the Balkans, Southern Europe (Greece, Italy) and parts of Central and Eastern Europe. H13A2 is also observed occasionally in Jewish maternal lineages (Ashkenazi and some Sephardic samples) and appears in some ancient DNA contexts tied to early Holocene and Neolithic populations in the Near East and southeastern Europe.

Historical and Cultural Significance

Because of its origin and distribution, H13A2 is informative for studies of post‑glacial recolonization of the Near East/Caucasus, as well as early Neolithic farmer dispersals from Anatolia into Europe. Its presence in ancient remains from Chalcolithic and Bronze Age contexts in the Caucasus and Anatolia supports a role in local population continuity and regional demographic change through the Neolithic and later Bronze Age periods. The occasional detection of H13A2 in European and Jewish contexts likely reflects multiple small‑scale movements, gene flow events, and founder effects rather than a single, large‑scale expansion.

Conclusion

H13A2 is a regionally focused maternal lineage within H13A that provides useful resolution for reconstructing maternal ancestry in the Caucasus and adjacent Near East, and for tracing Neolithic and post‑Neolithic female‑mediated gene flow into neighboring regions. Continued mitogenome sequencing and targeted ancient DNA sampling in the Caucasus, Anatolia and the Levant will further refine the substructure, age estimates and migratory history of H13A2 and its downstream branches.

Key Points

  • Origins and Evolution
  • Subclades (if applicable)
  • Geographical Distribution
  • Historical and Cultural Significance
  • Conclusion
Chapter II

Tree & Relationships

Phylogenetic context and subclades

Evolution Path

This haplogroup's evolutionary journey from its earliest ancestor to the present.

Steps Haplogroup Age Estimate Archaeology Era Time Passed Immediate Descendants Tested Modern Descendants Ancient Connections
1 H13A2 Current ~8,000 years ago 🌾 Neolithic 7,500 years 3 33 0
2 H13A ~10,000 years ago 🌾 Neolithic 10,000 years 2 140 3
3 H13 ~12,000 years ago 🌾 Neolithic 12,000 years 3 181 0
4 H1 ~15,000 years ago 🏹 Mesolithic 15,000 years 28 2,656 74
5 H ~25,000 years ago 🦴 Paleolithic 25,000 years 9 6,551 991
6 HV ~30,000 years ago 🦴 Paleolithic 30,000 years 10 7,905 228
7 R ~60,000 years ago 🦴 Paleolithic 60,000 years 12 10,987 57
8 N ~60,000 years ago 🦴 Paleolithic 60,000 years 15 15,452 13
9 L3 ~70,000 years ago 🦴 Paleolithic 70,000 years 11 17,621 6
10 L ~160,000 years ago 🦴 Paleolithic 160,000 years 7 18,987 5

Siblings (1)

Other branches from the same parent haplogroup

Chapter III

Where in the World

Geographic distribution and modern presence

Place of Origin

Near East / Caucasus

Modern Distribution

The populations where MTDNA haplogroup H13A2 is found include:

  1. Caucasus populations (Armenians, Georgians, Azeris)
  2. Anatolian / Turkish populations
  3. Northwestern Iran and adjacent Near Eastern groups
  4. Levantine populations (Lebanon, Syria) at low to moderate frequencies
  5. Balkan populations and Southern Europe (Greece, Italy) at low to moderate frequencies
  6. Ashkenazi and some Sephardic Jewish maternal lineages (sporadic occurrences)
  7. Central and Eastern European populations at low frequencies
  8. Western European populations sporadically and in ancient contexts
CHAPTER IV

When in Time

Your haplogroup in the context of human history

~10k years ago

Neolithic Revolution

Agriculture begins, settled communities form

~7k years ago

Haplogroup H13A2

Your mtDNA haplogroup emerged in Near East / Caucasus

Near East / Caucasus
~5k years ago

Bronze Age

Metalworking, writing, and early civilizations

~3k years ago

Iron Age

Iron tools, expanded trade networks

~2k years ago

Classical Antiquity

Greek and Roman civilizations flourish

Present

Present Day

Modern era

Your Haplogroup
Historical Era
Chapter IV-B

Linked Cultures

Ancient cultures associated with mtDNA haplogroup H13A2

Cultural Heritage

These ancient cultures have been linked to haplogroup H13A2 based on matching ancient DNA samples from archaeological excavations. The presence of this haplogroup in these cultures provides insights into the migrations and population movements of populations carrying this haplogroup.

Catacomb Culture Croatian Bronze-Iron Transition Croatian Middle Bronze Age Early Medieval Serbian Hasanlu Culture Jierzankale Culture Katelai Culture Late Bronze Age Armenian Late Neolithic Azerbaijani Raja Gira Roopkund Culture Tepe Anau
Culture assignments are based on archaeological context of ancient DNA samples and may represent regional associations during specific time periods.
Chapter V

Sample Catalog

Top 50 ancient DNA samples directly related to haplogroup H13A2 or parent clades

50 / 50 samples
Portrait Sample Country Era Date Culture mtDNA Match
Portrait of ancient individual R111 from Italy, dated 1 CE - 200 CE
R111
Italy Imperial Rome 1 CE - 200 CE Roman Empire H Direct
Portrait of ancient individual R113 from Italy, dated 1 CE - 200 CE
R113
Italy Imperial Rome 1 CE - 200 CE Roman Empire H26a1 Direct
Portrait of ancient individual R128 from Italy, dated 1 CE - 400 CE
R128
Italy Imperial Rome 1 CE - 400 CE Roman Empire HV-b Direct
Portrait of ancient individual R1543 from Italy, dated 1 CE - 400 CE
R1543
Italy Imperial Rome 1 CE - 400 CE Roman Empire H1e Direct
Portrait of ancient individual R1545 from Italy, dated 1 CE - 400 CE
R1545
Italy Imperial Rome 1 CE - 400 CE Roman Empire H8c Direct
Portrait of ancient individual R37 from Italy, dated 1 CE - 400 CE
R37
Italy Imperial Rome 1 CE - 400 CE Roman Empire HV Direct
Portrait of ancient individual R41 from Italy, dated 1 CE - 400 CE
R41
Italy Imperial Rome 1 CE - 400 CE Roman Empire H5a1 Direct
Portrait of ancient individual R43 from Italy, dated 1 CE - 400 CE
R43
Italy Imperial Rome 1 CE - 400 CE Roman Empire H7f Direct
Portrait of ancient individual R49 from Italy, dated 1 CE - 400 CE
R49
Italy Imperial Rome 1 CE - 400 CE Roman Empire H1u Direct
Portrait of ancient individual R75 from Italy, dated 1 CE - 200 CE
R75
Italy Imperial Rome 1 CE - 200 CE Roman Empire H14a Direct
Chapter VI

Carrier Distribution Map

Geographic distribution of 100 ancient DNA samples carrying haplogroup H13A2

Time Period Filter
All Time Periods
Showing all samples
Each marker represents an ancient individual
Chapter VII

Temporal Distribution

Distribution of carriers across archaeological periods

Chapter VIII

Geographic Distribution

Distribution of carriers by country of origin

Chapter IX

Country × Era Distribution

Cross-tabulation of carrier countries and archaeological periods

Data

Data & Provenance

Source information and data quality

Last Updated 2026-02-16
Confidence Score 50/100
Coverage Low
Data Source

We use the latest phylotree for MTDNA haplogroup classification and data.