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mtDNA Haplogroup • Maternal Lineage

H3H

mtDNA Haplogroup H3H

~10,000 years ago
Iberian Peninsula / Atlantic Europe
3 subclades
14 ancient samples
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Chapter I

The Story

The journey of mtDNA haplogroup H3H

Origins and Evolution

H3H is a downstream subclade of mitochondrial haplogroup H3, itself a daughter lineage of the broader macro-haplogroup H. Haplogroup H3 (and by extension H3H) is widely interpreted in population genetic studies as a lineage that expanded from southwestern European refugia after the Last Glacial Maximum. Genetic and ancient DNA evidence places the emergence of H3 lineages in the Early Holocene (~10 kya) on the Iberian/Atlantic margin, consistent with a post‑glacial re‑colonization of western Europe from Iberian or nearby Franco-Cantabrian refugia. H3H represents one of the sublineages that diversified during or after these demographic expansions and has persisted in modern populations of the Atlantic fringe.

Subclades

H3H is nested within H3 and may itself contain further downstream variants identified in high-resolution sequencing studies. The resolution and naming of subclades within H3 (including H3H) depend on complete mtDNA sequencing and ongoing phylogenetic refinement; many H3 sublineages show geographically localized patterns, with some subclades concentrated in Iberia and others distributed more broadly across Western Europe. Because nomenclature evolves, specific downstream branches of H3H are best tracked via updated phylogenies (e.g., PhyloTree, EMPOP) and full mitogenome studies.

Geographical Distribution

H3H shows a distribution concentrated on the Atlantic and western seaboard of Europe, with the highest frequencies and diversity in the Iberian Peninsula and elevated presence in Atlantic France, the British Isles, and other parts of western Europe. Lower frequencies are observed in southern Europe (including parts of Italy and Sardinia), northwest Africa (Maghreb), and the Near East—areas that have received gene flow from western Europe at various periods. The pattern is consistent with a point of origin on the Iberian/Atlantic margin followed by coastal and inland dispersals during the Holocene.

Historical and Cultural Significance

H3H is informative for studies of post‑glacial re‑expansion and later demographic processes in western Europe. While the initial diversification of H3H likely predates the Neolithic, the lineage continued to be carried by populations through the Neolithic and into later prehistoric cultures. H3 and its subclades (including H3H) have been detected in some archaeological contexts associated with Atlantic and western European cultural horizons, and they appear at varying frequencies in ancient DNA from the Mesolithic through historic periods. The presence of H3H in modern Basque and other Atlantic‑fringe populations underscores its value in tracing maternal continuity and regional ancestry.

Conclusion

mtDNA H3H is a geographically informative maternal lineage reflecting Early Holocene expansions from southwestern Europe. It is strongest in Iberia and the Atlantic fringe, where it contributes to regional genetic distinctiveness, and it serves as a useful marker for studies of post‑glacial demography, regional continuity, and the maternal genetic legacy of western Europe.

Key Points

  • Origins and Evolution
  • Subclades
  • Geographical Distribution
  • Historical and Cultural Significance
  • Conclusion
Chapter II

Tree & Relationships

Phylogenetic context and subclades

Evolution Path

This haplogroup's evolutionary journey from its earliest ancestor to the present.

Steps Haplogroup Age Estimate Archaeology Era Time Passed Immediate Descendants Tested Modern Descendants Ancient Connections
1 H3H Current ~10,000 years ago 🌾 Neolithic 10,000 years 3 24 14
2 H3 ~10,000 years ago 🌾 Neolithic 10,000 years 25 340 23
3 H ~25,000 years ago 🦴 Paleolithic 25,000 years 9 6,551 991
4 HV ~30,000 years ago 🦴 Paleolithic 30,000 years 10 7,905 228
5 R ~60,000 years ago 🦴 Paleolithic 60,000 years 12 10,987 57
6 N ~60,000 years ago 🦴 Paleolithic 60,000 years 15 15,452 13
7 L3 ~70,000 years ago 🦴 Paleolithic 70,000 years 11 17,621 6
8 L ~160,000 years ago 🦴 Paleolithic 160,000 years 7 18,987 5
Chapter III

Where in the World

Geographic distribution and modern presence

Place of Origin

Iberian Peninsula / Atlantic Europe

Modern Distribution

The populations where MTDNA haplogroup H3H is found include:

  1. Iberian populations (Spain, Portugal, including Basques)
  2. Western Europeans (France, Atlantic France, British Isles)
  3. Southern Europeans (parts of Italy, Sardinia at lower frequencies)
  4. Northwest Africa (Maghreb, lower frequencies due to historical/prehistoric gene flow)
  5. Near East / Anatolia (low frequencies, reflecting broader H presence and later movements)
  6. Modern populations in the Atlantic fringe and diaspora communities (variable, generally low to moderate)
CHAPTER IV

When in Time

Your haplogroup in the context of human history

~10k years ago

Neolithic Revolution

Agriculture begins, settled communities form

~10k years ago

Haplogroup H3H

Your mtDNA haplogroup emerged in Iberian Peninsula / Atlantic Europe

Iberian Peninsula / Atlantic Europe
~5k years ago

Bronze Age

Metalworking, writing, and early civilizations

~3k years ago

Iron Age

Iron tools, expanded trade networks

~2k years ago

Classical Antiquity

Greek and Roman civilizations flourish

Present

Present Day

Modern era

Your Haplogroup
Historical Era
Chapter IV-B

Linked Cultures

Ancient cultures associated with mtDNA haplogroup H3H

Cultural Heritage

These ancient cultures have been linked to haplogroup H3H based on matching ancient DNA samples from archaeological excavations. The presence of this haplogroup in these cultures provides insights into the migrations and population movements of populations carrying this haplogroup.

Avar Culture Danish Medieval French Neolithic Ingrian Iron Age Culture La Tène Culture Lepenski Vir Culture Nordic Late Neolithic Viking Culture Zealand Saxon
Culture assignments are based on archaeological context of ancient DNA samples and may represent regional associations during specific time periods.
Chapter V

Sample Catalog

Top 14 ancient DNA samples directly related to haplogroup H3H or parent clades

14 / 14 samples
Portrait Sample Country Era Date Culture mtDNA Match
Portrait of ancient individual VIII8 from Russia, dated 75 CE - 200 CE
VIII8
Russia Iron Age Ingria, Russia 75 CE - 200 CE Ingrian Iron Age Culture H3h Direct
Portrait of ancient individual VIII8 from Russia, dated 75 CE - 200 CE
VIII8
Russia Iron Age Baltic 75 CE - 200 CE H3h Direct
Portrait of ancient individual I17614 from Czech Republic, dated 380 BCE - 330 BCE
I17614
Czech Republic Iron Age La Tène Culture, Czech Republic 380 BCE - 330 BCE La Tène Culture H3h Direct
Portrait of ancient individual I15742 from Croatia, dated 661 CE - 775 CE
I15742
Croatia Medieval Croatia 661 CE - 775 CE Croatian Medieval H3h6 Direct
Portrait of ancient individual TMH-798 from Hungary, dated 700 CE - 900 CE
TMH-798
Hungary Late Avar Period Hungary 700 CE - 900 CE Avar Culture H3h Direct
Portrait of ancient individual VK343 from Sweden, dated 800 CE - 1100 CE
VK343
Sweden Viking Age Sweden 800 CE - 1100 CE Viking H3h10 Direct
Portrait of ancient individual VK343 from Sweden, dated 800 CE - 1100 CE
VK343
Sweden The Viking Age 800 CE - 1100 CE H3h10 Direct
Portrait of ancient individual VK409 from Russia, dated 900 CE - 1200 CE
VK409
Russia Viking Age Russia 900 CE - 1200 CE Viking Culture H3h Direct
Portrait of ancient individual VK409 from Russia, dated 900 CE - 1200 CE
VK409
Russia The Viking Age 900 CE - 1200 CE H3h Direct
Portrait of ancient individual KPN008 from Denmark, dated 1000 CE - 1100 CE
KPN008
Denmark Saxon Medieval Zealand, Denmark 1000 CE - 1100 CE Zealand Saxon H3h Direct
Chapter VI

Carrier Distribution Map

Geographic distribution of 14 ancient DNA samples carrying haplogroup H3H

Time Period Filter
All Time Periods
Showing all samples
Each marker represents an ancient individual
Chapter VII

Temporal Distribution

Distribution of carriers across archaeological periods

Chapter VIII

Geographic Distribution

Distribution of carriers by country of origin

Chapter IX

Country × Era Distribution

Cross-tabulation of carrier countries and archaeological periods

Data

Data & Provenance

Source information and data quality

Last Updated 2026-02-16
Confidence Score 50/100
Coverage Low
Data Source

We use the latest phylotree for MTDNA haplogroup classification and data.